Candidatus Nitrosocaldus cavascurensis: NCAV_0872
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Entry
NCAV_0872 CDS
T05329
Symbol
rfcS
Name
(GenBank) Replication factor C small subunit
KO
K04801
replication factor C small subunit
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCAV_0872 (rfcS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncv03032
]
NCAV_0872 (rfcS)
DNA replication proteins [BR:
ncv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
NCAV_0872 (rfcS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Rep_fac_C
RCF1-5-like_lid
RuvB_N
AAA_3
Rad17
Mg_chelatase
DNAX_ATPase_lid
AAA_22
AAA_14
AAA_assoc_2
AAA_2
AAA_16
PhoH
AAA_25
AAA_28
AAA_5
nSTAND3
RNA_helicase
Cdc6_lid
IstB_IS21
AAA_18
AAA_19
ResIII
Viral_helicase1
AAA_30
ABC_tran
AAA_24
Motif
Other DBs
NCBI-ProteinID:
SPC34049
UniProt:
A0A2K5AR24
LinkDB
All DBs
Position
NCAV:756170..757216
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AA seq
348 aa
AA seq
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MNYRVSILFILALEQGMSIEQLMWVEKYRPKRLDDVVNQKEIVEGIKRIIASPAGMPNML
FAGPAGVGKTTVALCIAREVLGEYWRDYTLELNASDERGINMVREKVKMFTRYTSIGSIP
FKIVILDEADEMTPEAQTALRRIMEDSASTSRFILICNYISQIIGPIQSRCVIFRFKSLA
RDDVVNHLANICKLEGVRYEDKALEMIYEFTSGDLRHAINILQAAASHGTVNDASVRSAL
GISYKARVGEVIRLALEGNFNDARLKMLELTKVHGLSERDFIKFASEEIMKGAIKDAGAN
TKGAELLRILAEYDYRLVVGAHPDIQLAALLAELARIGKASSGGRAGK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaactatagagttagcattttattcatccttgctctagagcagggtatgagcatagag
cagttgatgtgggtagagaagtataggccaaagaggcttgatgatgttgttaaccagaaa
gagatagttgagggtataaagaggataattgcaagccctgctgggatgccaaatatgctc
tttgctggtccagcaggtgttggaaagacaacagttgcactatgcattgctagagaggtg
cttggagagtactggagggattacacacttgagcttaatgcatcagatgagagaggtata
aacatggttagggagaaggtgaagatgttcactagatatactagcataggtagcatacca
ttcaagatagttatactggatgaggctgatgagatgacccctgaggcacagacagcgttg
aggaggataatggaggatagtgcaagtacgagcaggttcatccttatctgcaactacatc
tcccagataatagggcctatacagagtagatgtgtgatcttcaggttcaagagccttgct
agggatgatgttgtaaaccaccttgcaaacatatgcaaacttgaaggagttaggtatgag
gataaggcattggagatgatatatgagttcacatctggagatctaaggcatgctataaac
atactacaagcagcagcaagccatggtactgttaacgatgctagcgttagatctgctctt
ggcatatcctataaggcaagagttggtgaggtgataagacttgcattagaagggaacttc
aacgatgcaaggttgaagatgcttgaacttaccaaagtgcacggcttatctgagagagac
ttcataaagtttgcaagcgaggagataatgaagggtgctataaaggatgcaggtgcaaat
acaaagggtgcagaactgttgaggatacttgctgaatatgattacaggcttgttgttggt
gcacatccagatatacagttagcagcactacttgcagagttggcaaggataggcaaagca
agtagtggcggtagggcaggtaagtaa
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