Candidatus Nitrosocaldus cavascurensis: NCAV_1101
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Entry
NCAV_1101 CDS
T05329
Name
(GenBank) Type-4 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCAV_1101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncv03400
]
NCAV_1101
Enzymes [BR:
ncv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NCAV_1101
DNA repair and recombination proteins [BR:
ncv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCAV_1101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
SPC34278
UniProt:
A0A2K5ARL0
LinkDB
All DBs
Position
NCAV:964119..964706
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AA seq
195 aa
AA seq
DB search
MDSLYDASNDSISKVVEEVKACRRCRLAEYRSNAVPGEGAYNSKIMFIGEAPGRTEDTLA
RPFVGSAGKVLDNALARAGIDRASVYITNIVKCRPPMNRRPMKDEINSCMPYLMREIMLV
NPKIICLLGRTAHDTLLKGSFREHMSRYVKRDGRLFFTTYHPAYVIYNNKLKEIFIRDII
SIKKMVDAMNNNDND
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
ttggatagcctgtacgatgcaagtaatgatagtataagcaaggttgtagaggaggttaaa
gcctgtagaaggtgtagattagcagagtataggagtaatgctgtgcctggagaaggagca
tataactcaaagatcatgttcataggcgaggctccaggcagaactgaggatacacttgca
agaccgttcgtaggctctgcaggtaaagtgctagataatgcacttgctagagcaggtata
gatagggctagtgtgtacataaccaacatcgtgaagtgtaggccaccaatgaatagaagg
cctatgaaggatgagataaactcatgcatgccatatcttatgagggagatcatgcttgta
aacccaaagataatctgcctgcttggaagaactgcacatgatacactgctgaagggatcg
ttcagagagcatatgagtagatatgtgaagcgtgatgggaggctattctttacaacatac
catccagcatatgttatctacaacaataagctcaaggagatcttcataagggatataata
agtataaagaaaatggttgatgctatgaataataatgataatgattga
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