Candidatus Nitrosocaldus cavascurensis: NCAV_1120
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Entry
NCAV_1120 CDS
T05329
Symbol
top6B
Name
(GenBank) Type 2 DNA topoisomerase 6 subunit B
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncv03032
]
NCAV_1120 (top6B)
Enzymes [BR:
ncv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCAV_1120 (top6B)
DNA replication proteins [BR:
ncv03032
]
Prokaryotic type
DNA Topoisomerases
NCAV_1120 (top6B)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c
HATPase_c_3
Ribosomal_S13
Pallilysin
Motif
Other DBs
NCBI-ProteinID:
SPC34297
UniProt:
A0A2K5ARN6
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All DBs
Position
NCAV:981106..983097
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AA seq
663 aa
AA seq
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MSIFAEISPSEFFYRNRDLAGFSNPTRAIYMTVRELVENSLDACDSSSILPEISVSIREQ
SDLQGMPDPKHYTVTVKDNGPGIEPEYVPLAFGKVLYGTKFTLKQNRGMFGLGATMAILY
GQITTNKPAVIRTVRDGYAYEYVMMLDIQRNKPIILRRNSVQVDDAGRGLEISITLLGDY
SKAQQKVRDYIAQTALITPYADIVLEEPNGSSISFKRIMDKMPNPPVEVKPHPAGIDVET
LRRLIQSEIGSIALHEVKDRFIKDVLRSSDKSIADAARERWDRLSTSMKTAASLLVMLNI
SVEDMDKVRIDRIDPLVNEIHYTTLLDGEYKSVKINDLEPFRSHLLSIAMGDTLISFLVK
NFQRVGLSTAKRFLAFADMDEGKRIGMLSNEEIVRLADAMQRYDGFLPPDATCLSPIGEE
ALEAGMRSIFKPEFVAVVQRPPSAYSGFPFIVEVGIAYGGSIEGKGIRLYRFANKIPLLY
DEGSDVAWKVIEEIDWARYKVKEDEMPIAIVTHICSTRIPYKTVGKEYIADRPEIEYELK
NAIRFLARRLSIYLSKKGSIAMAKKRLGLYSRYIPLLARFVTELSRAERMPKYKVLLRLG
EQYEQEITSMGLGAGMSGEAGDGGVDGEVSGIGIGSMENGGDRSGVGGVEVEGDGQGKGK
EER
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatttgcagagataagcccatctgagttcttctacaggaatagagatctagca
ggattcagcaacccaacaagggcaatatacatgactgtaagggagttggtagagaactct
ttggatgcatgtgactcctcaagcatactgcctgagataagtgtatctatacgtgagcag
agcgatcttcaaggtatgccagaccccaaacattacacagtaacggtcaaggataatgga
cctggaatagagccagagtatgtacctctagcatttggtaaggtgctctatggtacgaag
ttcacactaaagcagaatagaggcatgtttggtttaggagcaaccatggctatactctat
ggtcagataacaaccaacaaaccagccgtgataaggactgtaagggatgggtatgcatat
gagtatgttatgatgcttgatatacaaaggaacaagcctataatattgaggaggaacagt
gttcaggttgatgatgctggaagggggttagagataagcataaccctacttggggactat
tctaaagcacaacagaaggtcagagattacatagcacagacagcactcatcactccatat
gcagatatagtgcttgaggagcctaatgggagtagcatatcattcaagaggataatggat
aagatgcctaaccctccagttgaggttaagcctcacccagcaggtatagatgttgagacc
ctaaggaggcttatacagagcgagataggctccatagcattgcatgaggttaaggatagg
ttcatcaaggatgtgttaagatcaagtgataaaagcattgctgatgctgcaagggagcgc
tgggataggctatctactagcatgaagactgcagcatcactgctagtcatgctgaatatc
agcgttgaggatatggataaggttaggatagataggatagatccacttgtaaatgagata
cactacacaacactgcttgatggtgagtataagagtgttaagatcaacgatcttgaacca
ttcagatcccatctactctccatagcaatgggtgatacactcatctccttccttgtaaag
aacttccagagggtagggttgagcacagccaagaggttccttgcatttgcagatatggat
gaagggaagaggataggcatgctaagcaatgaggagatagttagacttgcagatgcaatg
cagagatacgatggcttcctccctccagatgcaacatgcctctctccaataggagaggag
gcactagaggcagggatgaggagcatattcaagccagagtttgtagcagttgtgcagagg
cctccaagtgcatactctggcttcccattcatagttgaggtagggatagcgtatggaggg
agtatagagggtaaggggataaggctctacaggtttgcaaacaagatacccttgctttat
gatgaggggagtgacgtcgcatggaaggttatagaggagatagattgggcaaggtacaag
gttaaggaggatgagatgccaatagcaatagtaactcacatatgctcaaccaggatacca
tacaagactgtaggtaaggagtacatagcagataggccagagatagagtatgagttgaag
aacgcaataaggttccttgcaaggaggctatcgatataccttagcaagaagggtagtatt
gcaatggcaaagaagaggcttggtttgtactcaaggtatataccattacttgcaaggttt
gttacagagttgagtagggctgaaaggatgcctaaatacaaagtactcttgaggctaggt
gaacagtatgagcaggagattacaagtatgggattaggagcagggatgagtggagaggct
ggtgatggaggtgtagatggagaggttagtggtattggtattggtagtatggagaatggt
ggggataggagtggtgtagggggtgtagaggtagagggagatggtcagggtaaagggaaa
gaagaaaggtaa
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