Candidatus Nitrosocaldus cavascurensis: NCAV_1168
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Entry
NCAV_1168 CDS
T05329
Symbol
prf
Name
(GenBank) Peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NCAV_1168 (prf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncv03019
]
NCAV_1168 (prf)
03012 Translation factors [BR:
ncv03012
]
NCAV_1168 (prf)
Messenger RNA biogenesis [BR:
ncv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
NCAV_1168 (prf)
Translation factors [BR:
ncv03012
]
Eukaryotic type
Release factors
NCAV_1168 (prf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_1
eRF1_3
acVLRF1
baeRF_family10
CPxCG_zf
Clr5
HypA
PUFD
Motif
Other DBs
NCBI-ProteinID:
SPC34335
UniProt:
A0A2K5ART3
LinkDB
All DBs
Position
NCAV:complement(1014931..1016178)
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AA seq
415 aa
AA seq
DB search
MGKSDSVRLYRLKRMLNELSQKKGRGTELISLYIPQGKPIHEVIATLREEYGTASNIKSD
STRNHVLDALTKTMQRLKLYTKTPENGLVIFCGALPTNGLGSEVVKIFEIEPPKPLNIFL
YRCDDHFHTEILKDMLKEEKVIGIIAIDSSEAGIGVLEGNKVEVVDHITSGVGGKHRAGG
QSARRYERLREMELNDYFNRVAEHAKSLLIDTYNVVGLIVAGPGPTKDDFLKNGYLDYRL
QKNVLAVLDISYAGREGVREALEKAQDILQEYRLMEEKRLVRRLFEEINSSKGLAVYGMQ
DVINALKSGVADIVLVNDNINRVRVEVVCKRCNARVERIVSIDKAIQVKQEMISSACSKC
SSIDYDVYEQDLIEYMDELAMNTGARVEVISSSTEDGKMLESLGQIAAILRYRIN
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtcagactctgtaagactctacaggttaaagcgtatgcttaatgagttgtca
cagaagaagggtagagggactgaactcatctccctctatataccccaaggcaagcctata
catgaggttatagcaacgctcagagaagagtatggtactgcctcaaacataaagtcagac
tctacaaggaaccatgtgcttgatgcattaacaaagaccatgcagaggctcaaactttat
acaaagacaccagagaatgggctagttatattctgtggagcattgcctacaaatggtcta
ggtagcgaggttgtcaagatatttgagatagaacctccaaagccattgaacatcttcctc
tacaggtgtgatgatcacttccatacagagatactgaaggatatgctcaaggaggagaag
gtgataggcataatagcaatagatagcagtgaagcaggaataggtgtacttgaaggtaac
aaggttgaggttgtggatcatataacctctggtgttggaggcaagcatagggcaggaggg
cagtcagcaaggaggtatgagaggttaagggagatggagttaaacgattacttcaacagg
gttgctgagcatgcaaagtcactccttatagatacttataatgtcgttggcttgatagtt
gctggcccaggaccaaccaaggatgacttccttaagaatggttatctagactataggttg
cagaagaacgttcttgcggtacttgacatctcatacgctggtagggaaggggttagagaa
gcgcttgagaaggctcaagatatactgcaggagtacaggctgatggaggagaagagactt
gttaggaggctatttgaggagataaactcaagcaaaggcttggcagtgtatggtatgcag
gatgtgataaatgcactcaagagtggtgttgcagatatagtgcttgtgaatgataacata
aacagggttagggtagaggttgtatgcaagaggtgtaatgcaagggtggagaggatagtg
agtatagataaggccatacaggttaagcaggagatgataagcagtgcatgcagcaagtgc
tcaagcatagactatgatgtgtatgagcaggatcttatagagtacatggatgaacttgca
atgaacacaggagcaagggttgaggtaatctcatcaagtactgaggatggtaagatgctt
gagagcctaggtcagatagcagcaatactcaggtataggataaattaa
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