Candidatus Nitrosocaldus cavascurensis: NCAV_1227
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Entry
NCAV_1227 CDS
T05329
Symbol
appF
Name
(GenBank) Oligopeptide transport ATP-binding protein AppF
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCAV_1227 (appF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncv02000
]
NCAV_1227 (appF)
Transporters [BR:
ncv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NCAV_1227 (appF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_16
Zeta_toxin
AAA_29
nSTAND3
RsgA_GTPase
Sigma54_activat
AAA_22
SMC_N
AAA_5
APS_kinase
AAA_13
AAA
TsaE
AAA_30
NACHT
AAA_33
Malic_M
PIF1
AAA_23
Motif
Other DBs
NCBI-ProteinID:
SPC34394
UniProt:
A0A2K5AS19
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All DBs
Position
NCAV:complement(1066657..1067697)
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AA seq
346 aa
AA seq
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MVMLDAGSTRSTRSTNLLEVEGLRKWFRIKRSILDILHGKQEGVVKAVDDVSFSVKQGST
FVLAGESGSGKSTIARLILRAIEPDGGSIRFAGRDVLSLDKRGLMWFRRSAQMIHQDPYS
SLNPRMKVISIVGEPLEVHGIKDRREKEEMVFKALEEVRLEPVEEIAYRYPHMLSGGQRQ
RVAIARALVLKPMLIVADEPVSMLDLSVRAEILELMQNLKVKHNITYIYITHDLSTARYF
GDSIAILYKGKIVEMGSIDDVLNEPLHPYTQALIDAIPEPDPASRLRDKVIRIRASTSIS
MDEANDHGCRFYARCPYAMDICREEPKLLEVKNGHLVSCFLYKSSV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggttatgttagatgctggctctactcgaagcactagaagcaccaacctgctagaggta
gaggggctaaggaagtggttcaggatcaagagatccatacttgatatactccatggtaag
caggagggtgtagtaaaggctgtagatgatgttagttttagtgtaaagcaaggctctaca
ttcgtacttgctggtgagtctggatctggtaagagcactatagcaaggctcatcctgagg
gcaatagagccagatggggggagcataaggtttgctggaagggatgtactctctctagat
aagagagggcttatgtggttcaggaggagtgcgcagatgatccatcaggacccttactca
tctctcaaccctaggatgaaggtaatctcaatagttggtgaacctctagaggttcatggt
ataaaggataggagggagaaggaggagatggtattcaaggcattggaggaggttaggctt
gagcctgttgaggagatagcatacaggtatcctcatatgctctctggagggcagaggcag
agggttgcaattgctagagcattagtgctgaagcctatgcttatagttgctgatgaacca
gtatccatgcttgatctatctgttagggctgagatacttgaactcatgcagaacctcaag
gttaagcataacataacctacatatacataacccatgacctctcaactgctaggtacttt
ggtgatagcatagcaatactctacaagggcaagatagttgagatgggtagcatagatgat
gtactaaatgaaccattgcatccatacacacaagcactgatagatgctataccagagcct
gatcctgcaagtaggttgagggataaggtgataaggataagggcaagtacaagcattagc
atggatgaagcaaatgatcatggatgtaggttctatgctagatgcccatatgcaatggat
atatgtagggaagaacctaaactgctagaggttaagaatgggcatcttgtgagttgcttc
ctctacaagtcatctgtttag
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