Candidatus Nitrosocaldus cavascurensis: NCAV_1262
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Entry
NCAV_1262 CDS
T05329
Name
(GenBank) protein of unknown function
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncv03000
]
NCAV_1262
Transcription factors [BR:
ncv03000
]
Prokaryotic type
Helix-turn-helix
Other families
NCAV_1262
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
DUF7436
HTH_IclR
Mnd1
DUF6926
Motif
Other DBs
NCBI-ProteinID:
SPC34429
UniProt:
A0A2K5AS40
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Position
NCAV:complement(1099518..1100420)
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AA seq
300 aa
AA seq
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MVLNSITRDNLYLLTKKLGLSAFESEAYMCFFEMGNGLSAKDISKCAGIPLTRVYDVMKS
LEEKCLVRQNKLSKPVKYYLNDPAYSLMFLLNKKKMQINEEIAMLESWVEDMKRLSINNV
DSAANIYPEWTLYDSEQDVYESLIPALIRDASREVIIVGRNVINTINERFVEETIKGIER
GITFKIIITVDSLDSLLTYSGEEVIEKKAMLIKLLQTYNMYSDLVYVRASDLINVVPFGI
FDVEKVGFSVQSPKNGKYIVTLVTDKKAIVSEFYEIFEDLWSKSLDIDLNRFADSDMRIA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgaactccattactagagataacctgtacttgttgactaagaagctgggttta
tcagcctttgaatcagaggcatacatgtgcttcttcgagatgggcaatggattatctgcc
aaggatataagcaagtgtgcaggcataccattgactagggtttacgatgttatgaaatca
ttggaggagaagtgtcttgtaaggcagaacaaactgagcaagcctgtaaagtactatctt
aacgatccagcgtactctctaatgttcttacttaacaagaagaagatgcagatcaatgag
gagattgccatgcttgagtcgtgggttgaagatatgaagaggttatccataaataatgtt
gacagtgcagcaaatatctatccagaatggacattatacgattcagagcaggatgtgtat
gagagccttataccagcactgatcagggatgcaagtagggaggttataatagttggaagg
aatgtaatcaatacaattaacgagaggttcgtagaggagactataaagggtattgaaagg
ggtatcacattcaagatcataataactgttgatagtcttgactcactgcttacatacagt
ggggaagaggtaatagaaaagaaggctatgctcataaaactccttcaaacatacaatatg
tatagtgatctggtatatgttagggctagtgatctcatcaacgttgtgccatttggtata
tttgatgtagagaaggtagggttctcagtccagtcgccaaagaatggcaagtacatagtt
acacttgttactgataagaaggctatagttagtgagttctatgagatatttgaggatctc
tggtcaaaatcattggatatagatttgaacaggtttgctgatagtgatatgcgtatagcc
tga
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