Candidatus Nitrosocaldus cavascurensis: NCAV_1299
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Entry
NCAV_1299 CDS
T05329
Symbol
HGP
Name
(GenBank) ERCC4-like helicase
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
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Motif
Pfam:
Helicase_C
DEAD
ResIII
RNA_helicase_helical
Flavi_DEAD
Cas3-like_C_2
Helicase_C_2
IstB_IS21
nSTAND3
HL_N-beta
Motif
Other DBs
NCBI-ProteinID:
SPC34466
UniProt:
A0A2K5AS33
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Position
NCAV:complement(1135294..1137048)
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AA seq
584 aa
AA seq
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MGMSTDMGIGSSSSNNNNNNNDDDGWIEHELIKPRSIEKRGYQISIASVARQKNTLVVLP
TGLGKTTIALLLIADTLKHGGRALFLAPTRVLVHQHYNFLKEHILHDGIAVLTGNTPRHE
RMEVWSSASVVCSTPQVTLNDIERGFIDAGDFALLVFDEAHRAVGDYSYGRIASLLANAS
SSTGAGVRIIGFTATLPDDKEKVLEIASNLMIERIEVRDESSPDVRPYIKDTKIEFVTIT
LTPVMRRIREHVERALQSRLEELKRLGVISSTRVNMSNLIDARESISGIKGSTVPLYSAI
RLSHALKVLDTQGITAFTRFYERLREKGGIGVRSLVEDRELRSAYELARGAELSGLEHPK
LSRLVEILRREGFSPDEGYYSVSSSNSNSNNNSNYRRGKVLIFTSYRDSVEVITSRLIAE
GFKVGYLIGKAGEYGLKQEEQVEAVNRFRAGEYSILVATSVGEEGLDIAECNLVIFYDNV
PSAIRFVQRKGRTGRRMPGKVIVLVAKDTIDEAYHWISRKKVRQVRSIASIVNRIIANRT
GNNKDYSSSNGKSSDISSSDDGASYGNNIYHSSTNLTNLDDFIK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgagtactgatatgggtataggctcaagcagtagtaataataataacaacaat
aacgatgatgatggatggattgagcatgaactgataaagccaaggagtatagagaagaga
gggtatcagataagtattgcaagtgttgcaaggcagaagaatacgcttgttgtgctacct
actggcttgggcaagacaacgatagcactgctcctcatagcagatacactcaagcatggt
gggagggcattgttccttgcaccaactagggtgcttgtgcatcagcactacaacttcctt
aaggagcacatactgcatgatggtattgcagtactaactggtaatacaccaaggcatgag
aggatggaagtatggagtagtgctagtgttgtatgctctacccctcaagtcacactcaac
gatatagagagaggttttatagatgctggtgactttgccttgctagtatttgatgaagca
cacagggcagttggagactactcatatggtaggatagcatcattactagcaaatgctagc
agcagtacaggagcaggtgtaaggataattggctttacagctacactcccagatgataag
gagaaggtgctagagatagcaagcaacctcatgatagagaggatagaggttagggatgag
agcagcccagatgtcagaccatacataaaggatacaaagatagagtttgtaaccattacc
ctcacaccagtgatgaggaggataagggagcatgtagagagggcactccagagcaggctt
gaggagctgaagaggctaggagtaataagtagtacaagggttaatatgagcaatctgata
gatgctagagagagtatatctggcataaagggttctacagtacctctctacagtgctata
aggcttagccatgcactcaaggtacttgatactcaaggtataacagcattcacaaggttc
tatgaacgcttaagggagaaaggaggcataggtgtaaggagccttgtggaggatagagag
ttgaggagtgcatatgaacttgctaggggagcagagctctctggattggagcatccaaaa
ctctcaaggctggtagagatactaaggagggaagggttctctcctgatgaaggctattat
agtgttagcagtagcaatagtaatagtaataataatagcaactataggagaggcaaggta
ctcatattcacaagctacagggactctgttgaggtaatcacatcaaggttgattgctgag
gggttcaaggttggttatctgataggcaaggcaggggagtatgggcttaagcaggaggag
caggtagaggcggttaacaggttcagggctggtgagtatagcatccttgtagcaacaagt
gttggggaggaagggctggatattgctgaatgtaacctagtcatcttctacgataatgtg
cctagtgctataaggtttgtgcagaggaaaggtagaacagggaggaggatgcctggtaag
gtgatagtgcttgtagcaaaggataccatagatgaggcataccactggataagcaggaag
aaggtgaggcaggttagaagcattgcaagtatagtgaataggattatagccaataggact
ggtaacaacaaagattatagtagcagtaatggtaagagtagtgatattagtagtagcgat
gatggtgctagttatggaaacaacatctaccatagcagtactaatctaaccaacttggac
gatttcataaaatag
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