Candidatus Nitrosocaldus cavascurensis: NCAV_1432
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Entry
NCAV_1432 CDS
T05329
Name
(GenBank) protein of unknown function
KO
K03124
transcription initiation factor TFIIB
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCAV_1432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncv03021
]
NCAV_1432
Transcription machinery [BR:
ncv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NCAV_1432
Prokaryotic type
Archaeal type
TFB
NCAV_1432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Motif
Other DBs
NCBI-ProteinID:
SPC34598
UniProt:
A0A2K5ASG8
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All DBs
Position
NCAV:complement(1259720..1260403)
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AA seq
227 aa
AA seq
DB search
MYSKSREIDGWVKDLLRAQYMLVGGDCMHGIYNSNSIFSRAAELYMDFSRVYRVKSKRVI
AYTALYTAIRLEGYAITVNAFAKRVGMDARRLAVCYRAMQRTLGLTVPNAALHAYVDEIV
RCIGNGVQDGQKGIDVTVLKDVSYRLADDAAKIMNSNGVNPAGVAAAIVYLALGDEGRRM
VSMKYLAVTAGISLVTLKKRVEELKVLLSKHGNAIPLQNKTDLISKE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtaagagcagggagatcgatggttgggttaaggatctgctgagagcgcagtat
atgcttgtaggaggtgattgcatgcatggcatatacaactccaactcaattttttcaagg
gctgcagaactttacatggacttcagcagggtgtatagggtaaagagtaagagggttata
gcgtatacagcactctatacagcaattaggcttgaaggatatgcaataaccgttaatgca
tttgcaaagagggttggtatggatgcaaggaggcttgcagtatgctatagagcaatgcag
agaacgttgggattaaccgtgcctaatgcagcactacatgcatatgtggatgagattgta
aggtgtataggcaatggtgtgcaggacgggcagaagggtattgatgttacagtgctcaag
gatgtatcgtataggttagcagatgatgctgctaagattatgaatagcaatggcgtaaac
cctgctggtgttgctgctgcaatagtgtatttagccttaggggatgaggggagaaggatg
gttagtatgaagtatctagcagtaactgcaggtataagcctagttactctaaagaagagg
gttgaggagttaaaggttctgctgagcaagcatggtaatgctataccattgcaaaacaag
actgatctgataagtaaggaataa
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