Candidatus Nitrosocaldus cavascurensis: NCAV_1465
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Entry
NCAV_1465 CDS
T05329
Symbol
trpS
Name
(GenBank) Tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NCAV_1465 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncv01007
]
NCAV_1465 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncv03016
]
NCAV_1465 (trpS)
Enzymes [BR:
ncv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
NCAV_1465 (trpS)
Amino acid related enzymes [BR:
ncv01007
]
Aminoacyl-tRNA synthetase
Class I (G)
NCAV_1465 (trpS)
Transfer RNA biogenesis [BR:
ncv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NCAV_1465 (trpS)
Prokaryotic type
NCAV_1465 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
DUF6815
Motif
Other DBs
NCBI-ProteinID:
SPC34631
UniProt:
A0A2K5ASL0
LinkDB
All DBs
Position
NCAV:1288768..1289883
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AA seq
371 aa
AA seq
DB search
MKEEGFTVTPWKVEGEVDYTRLVNEFGTQLIDEELLARIKRFAGRLHPLLKLGYFFSHRD
LDWILDMYEKGERFYLYTGRGPSGNVHLGHILPWVFTKYLQDSFNVNLIFQITDDEKFLY
TDGRNMDEISRYAYENILDIIAVGFKPEKSKIIVDTKHINHLYPIAIEIAKKLTFSTVRA
TFGFTSSTNIGMILFPAIQAAPCFLPSKIEGKPTPCLIPAAIDQDPYWRITRDVAEKLGY
YKPAQIHSKFLPGLGMQGKMSSSQPETAIFTTDEPEVAEKKVMNAFTGGQPTIALQRRLG
ADAYRCPVFWYLRYMFEDEKSSDERYVKCRSGSLLCYECKYALADAVKRYLKEFQIKREH
ARDMVDRFMFD
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagggcttcactgtaacgccatggaaggttgaaggggaggtagactataca
aggcttgtaaatgagtttggtacccaactaatagatgaggagttactagcaaggataaag
aggtttgctggaaggttgcatccattgctcaagcttgggtacttcttcagccacagagac
ctagactggatccttgatatgtatgagaagggtgagaggttctacctctacactggaaga
ggaccatctggcaatgttcatctagggcatatactaccatgggtgtttacaaagtattta
caggatagtttcaatgtgaacctgatattccagataactgatgatgagaagttcctctat
accgatgggaggaacatggatgagataagcaggtatgcatatgagaacatactggatata
atagcagttggattcaagccagagaagagcaagataatagttgatacaaagcatattaac
catctatacccaattgctatagagattgcaaagaagctaacgttctcaactgtaagagct
acatttgggttcacatcatcaacaaacatagggatgatactcttccctgcaatacaggct
gcaccatgcttccttccatcaaagatagaaggtaagcctacaccatgcctcatccctgct
gcaatagaccaagatccatactggaggattacaagggatgttgctgagaagttaggatac
tacaagcctgcacagatacactccaagttccttccagggttaggtatgcagggcaagatg
tcatcatcacaaccagagactgcaatattcactacagatgagccagaggttgctgagaag
aaggttatgaatgcattcactggaggccaaccaactatagcactgcagagaaggcttggt
gctgatgcatacagatgtcctgtattctggtacctaaggtacatgttcgaggatgagaag
agttcagatgagaggtatgtgaagtgtaggagcggctcgctcttatgctatgagtgcaag
tatgcactggcagatgctgtgaagagatatcttaaggagtttcagatcaagagggagcat
gcaagggatatggtggatagattcatgtttgattga
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