Candidatus Nitrosocaldus cavascurensis: NCAV_1496
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Entry
NCAV_1496 CDS
T05329
Symbol
rpoH
Name
(GenBank) DNA-directed RNA polymerase subunit H
KO
K03053
DNA-directed RNA polymerase subunit H [EC:
2.7.7.6
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCAV_1496 (rpoH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncv03021
]
NCAV_1496 (rpoH)
Enzymes [BR:
ncv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCAV_1496 (rpoH)
Transcription machinery [BR:
ncv03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NCAV_1496 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb5_C
HPS3_C
PASTA
Motif
Other DBs
NCBI-ProteinID:
SPC34662
UniProt:
A0A2K5ASN6
LinkDB
All DBs
Position
NCAV:complement(1317497..1317733)
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AA seq
78 aa
AA seq
DB search
MSNRMIRHEYVPEHILLSKEEAEEVLKRYHVKPNQLPFILASDPAIRNLNAKPGDIVKII
RKSPTAGVSIYYRYVVEG
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataggatgataaggcatgagtacgtgcctgaacatatacttctcagcaaggag
gaggctgaagaggtactcaagaggtaccatgtaaaacctaaccaactcccattcatactt
gcaagtgacccagcgataaggaaccttaatgctaagcctggagatatagttaagataata
aggaagagcccaacagcaggggtaagtatatactacagatatgtagtagaggggtaa
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