Candidatus Nitrosocaldus cavascurensis: NCAV_1519
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Entry
NCAV_1519 CDS
T05329
Symbol
gds
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv00900
Terpenoid backbone biosynthesis
ncv01100
Metabolic pathways
ncv01110
Biosynthesis of secondary metabolites
Module
ncv_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NCAV_1519 (gds)
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
NCAV_1519 (gds)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ncv01006
]
NCAV_1519 (gds)
Enzymes [BR:
ncv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
NCAV_1519 (gds)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
NCAV_1519 (gds)
2.5.1.29 geranylgeranyl diphosphate synthase
NCAV_1519 (gds)
Prenyltransferases [BR:
ncv01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
NCAV_1519 (gds)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
SPC34685
UniProt:
A0A2K5ASR0
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All DBs
Position
NCAV:1338872..1339876
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AA seq
334 aa
AA seq
DB search
MNVAIEQDIRDVARRVDEIITSTLKGEPYILYDAALHYITSGGKRLRPYMLVKCSELCNG
SADKALYIASAMEMVHNFTLVHDDIMDGDEVRHGVPTVHRAYGLPYGILAGDLLLIYAFK
TVAYYGRMAGLDDSTIVRLVDVLAKYCIVLSEGQAMDMEIASSTTIPDEEQYIAMVTKKT
ASLFEASCMMGAITAGADEDAVEKVAGYGRSIGIAFQLVDDLIGVVGDPKVTKKPVGNDI
REGKKTLPILLALNKCDEDSRRRILSLLGSKQNIDENELLYAINLMKGMGIDREVREMAG
KYADDATARLKGFKESSAKHALEHIARLIVERSA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagcaatagaacaggatataagggatgtggcaagaagggttgatgagattata
acctctacattgaagggtgaaccatacatactctacgatgcagcactacactacataact
agcggggggaagaggcttagaccatatatgcttgttaagtgctctgaactatgcaatggt
agtgctgataaggcactctacatagcctctgccatggagatggtgcataacttcacactt
gtacatgatgatataatggatggtgatgaggttaggcatggtgtgcctacagtgcatagg
gcatatggtcttccatacgggatacttgctggtgatctactactcatatatgcattcaag
acagtagcatactatggaaggatggcagggctggatgactcaaccatagtaaggttggtc
gatgtgcttgcaaagtactgtatagtgctgagcgaggggcaggctatggatatggagata
gcatcaagcacaacaataccagatgaagagcagtacatagcaatggttaccaagaagaca
gcatctctatttgaggcatcatgcatgatgggtgcaataactgcaggggcagatgaggat
gctgtagagaaggttgcagggtatggcaggagtatagggatagcattccaacttgtagat
gatctcataggggttgttggggatcctaaggtgacaaagaagccagttggtaatgatata
agggaggggaagaagacacttccaatactactagcattaaacaagtgcgatgaggatagt
aggaggaggattctatccctactaggctctaaacagaatatagatgagaatgaactgctc
tatgcaataaacctcatgaagggtatgggtatagatagagaggtaagggagatggctggt
aagtatgctgatgatgctactgctagattgaagggtttcaaggagagcagtgccaagcat
gcactagagcatatagcaaggttgatagttgagaggagtgcatga
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