Candidatus Nitrosocaldus cavascurensis: NCAV_1543
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Entry
NCAV_1543 CDS
T05329
Name
(GenBank) Transcriptional regulator, AsnC family (fragment)
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncv03000
]
NCAV_1543
Transcription factors [BR:
ncv03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
NCAV_1543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
AsnC_trans_reg_3
HTH_11
ACT_4
TrmB
MarR
Gp41_Mu
Motif
Other DBs
NCBI-ProteinID:
SPC34708
UniProt:
A0A2K5AST4
LinkDB
All DBs
Position
NCAV:1356416..1356907
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AA seq
163 aa
AA seq
DB search
MNRLDELDLKILYELVNDASISVPEMSRKIGANTSVIYSRIKRLLKLGVIKKYTIIMDES
KLGVNINAIVGINRDPKAKQHVYEEIKNIPQVTNISEVSGRFDMLVSIGVKNLEELHNVV
INRIGKIDGILNTETFVELHKSENKAVYVKSLLEQQKQKVVLE
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaggcttgatgagttggatctgaagatactctacgaactggttaacgatgcctcc
atatcagtgccagagatgagtaggaagataggtgcaaacacatcggtgatatacagcagg
ataaagagactgctcaagcttggggtgataaagaagtatacgatcataatggatgagagc
aagttaggggttaacataaatgctatagttgggataaacagggatccaaaggcaaagcag
catgtgtatgaggagataaagaatatacctcaggtaactaacatctcagaggtgtctggg
aggtttgatatgcttgtgagcataggtgtaaagaacctagaggagttgcacaatgttgtt
ataaataggataggtaagatagatggtatacttaacacagagacgtttgttgaactacac
aagagcgagaataaggctgtgtatgtaaagtcactgcttgaacagcagaagcagaaggta
gtacttgaatag
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