Candidatus Nitrosocaldus cavascurensis: NCAV_1793
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Entry
NCAV_1793 CDS
T05329
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv00260
Glycine, serine and threonine metabolism
ncv00630
Glyoxylate and dicarboxylate metabolism
ncv00670
One carbon pool by folate
ncv00680
Methane metabolism
ncv01100
Metabolic pathways
ncv01110
Biosynthesis of secondary metabolites
ncv01120
Microbial metabolism in diverse environments
ncv01200
Carbon metabolism
ncv01230
Biosynthesis of amino acids
ncv01240
Biosynthesis of cofactors
ncv04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NCAV_1793 (glyA)
09102 Energy metabolism
00680 Methane metabolism
NCAV_1793 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCAV_1793 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NCAV_1793 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NCAV_1793 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NCAV_1793 (glyA)
Enzymes [BR:
ncv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NCAV_1793 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
SelA
Motif
Other DBs
NCBI-ProteinID:
SPC34956
UniProt:
A0A2K5ATH6
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All DBs
Position
NCAV:1570204..1571562
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AA seq
452 aa
AA seq
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MVASNENGNDEAYKHYSNVLRLLREHHSWFNRCIPLIASENVPSPAVREAIVSDFANRYA
EGWPGERVYAGCIYIDQVELICIELAKRVFRAEFADVRPVSGVVANLAVYAAFTEPSDTM
LALAIPNGGHISHGKREHSGTAGLVRGLQVETFAFNKEEMNIDVDATIKKVEEMKRNSND
SKVPKLAMFGASLFLFPHPVKELADYLRSNNITICYDAAHVAGLIAGNEFQDPLREGADV
MTMSTHKTLFGPQGGMILSFEKYAESIKKAVFPGNTSSHHLHNVAGKAIALAEMLAFGRD
YARQVVRNAKALAEALYNLGFDVLGAKHGFTRSHQVAVDVSRYGDGGSIEQMLERAGIIC
NRQLLPGDIKAGRNYKHPGGIRLGTSEVTRLGMREQDMVEIARFIKRVVVDREEVSKVAN
DVMELRKDFQKVHYAFDDNVGAYEYISLVKER
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaagtaatgagaatggcaatgatgaagcgtacaagcactacagcaatgtcttg
aggctcctaagagagcatcactcttggttcaataggtgcatacctttgatagcaagcgag
aacgtgcctagtcctgctgttagggaggctatagtctctgactttgcaaacaggtatgct
gagggatggccaggtgagcgtgtgtatgctggatgcatatacatagatcaggttgagttg
atatgcatagaactagcaaagagggtctttagggctgagtttgctgatgttagaccagta
tctggtgtggtagcaaaccttgctgtatatgctgcgttcacagaaccttcagataccatg
cttgctctagcaataccaaatggaggacatatctcccatgggaagagggagcattctggt
actgctggtcttgttagagggttgcaggtagagacttttgcattcaacaaggaggagatg
aacatagatgttgatgctacaataaagaaggttgaggagatgaagaggaatagtaatgat
agcaaggttccaaaacttgcaatgtttggtgcaagtctcttcctcttcccccatcctgtt
aaggagttggcagattaccttcgctcaaataacataaccatatgctatgatgctgcacat
gttgcagggcttatagcagggaatgagttccaggatccattgagagaaggggcagatgtt
atgactatgagcacacataagacgctatttggtcctcaaggaggaatgatactctcattt
gagaagtatgctgagagtataaagaaggctgtcttccctggcaacactagcagccatcat
ctccacaatgtagcaggtaaggctatagcactagcagagatgcttgcatttggtagggat
tatgctaggcaggttgttaggaatgctaaagcattggcagaagcactgtataaccttgga
tttgatgtgcttggagcaaaacatggttttacaagatctcatcaggttgctgttgatgtg
agcaggtatggtgatggagggagcatagagcagatgcttgagagggctgggatcatatgc
aataggcagttattgccaggggatataaaggctgggaggaactataagcatccagggggc
ataaggcttggaacatcagaggttactaggcttggtatgagggagcaggatatggttgag
atagcaaggttcatcaagagggtagttgtagatagggaagaggtaagcaaggtagcaaat
gatgtaatggagttaaggaaggacttccagaaggtccattatgcattcgatgataacgta
ggggcatacgaatacatctcattggtaaaggagaggtag
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