Nostoc carneum: NIES2107_00250
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Entry
NIES2107_00250 CDS
T10358
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ncw Nostoc carneum
Pathway
ncw03420
Nucleotide excision repair
ncw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIES2107_00250
03430 Mismatch repair
NIES2107_00250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncw03400
]
NIES2107_00250
Enzymes [BR:
ncw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES2107_00250
DNA repair and recombination proteins [BR:
ncw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIES2107_00250
MMR (mismatch excision repair)
Other MMR factors
NIES2107_00250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
DEAD
Viral_helicase1
AAA_11
ResIII
AAA_30
DUF3553
GpA_ATPase
GA
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
BAY28201
LinkDB
All DBs
Position
44247..46574
Genome browser
AA seq
775 aa
AA seq
DB search
MTTTIDFLSHLNPSQRQAVEHYCGPLLVVAGAGSGKTRALTYRIANLILKHRVAPENILA
VTFTNKAAREMKERIQKLFAEEEAIKQHGTKFDLLTEYQQTQLRSQVYRETIKDLWCGTF
HSLFSRILRFDIEKYQDEKGRRWNKNFSIFDESDAQSLVKEIVTKQLNLDDKKFDHRSVR
YAISNAKNQGFSPQDFEREQPNYRGRVIADVYNRYQDKLAENNALDFDDLILIPTRLFQQ
NEQVLGYWHRKFCHILVDEYQDTNRTQYDLIRLLVTNGEDRKSEWKWKNRSVFVVGDADQ
SIYSFRMADFTILLEFQNDFGDGLPDADTRTMVKLEENYRSCENILQAANELIENNTQRI
DKILRPTRGAGEQIYCHKADNELDEAAFIIDQIRSLEYQNPELNWGSFAILYRTNAQSRP
FEELLVKYQIPYTVVGGMRFYDRKEIKDVIAYLRAIANPADTVSLLRVINTPRRGIGKTT
IDALINASQQLGTTLWEILSDDTSVNTLAGRGAKSVKAFAEMISRWQGEIGTMPAAEIVQ
GILEDSGYVQDLLSQGTDESQDRIQNVQELYNAVLQFQEENEDATLQGFLQSTALSSDLD
NLKEGKTAVSLMTLHASKGLEFPVVFLVGLEQGLFPGYRSLSDPASLEEERRLCYVGITR
AQERLYLSHARERRLYGSREPAVRSQFLDELPEELLANGRRGRQTYTKPATVTNGNGNGK
QNWQVGDRVLHKSFGVGEITHVFGDGHKLSVAIKFANLGQKIIDPRVAQLQKVDY
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaactattgactttctcagccatcttaatcccagccaacgtcaagccgtagaa
cattactgcggcccgctgctagttgtggctggtgcaggttccggtaaaacacgggcgttg
acttatcggattgctaacctgattctgaaacatcgtgtagctcccgaaaatattttagcg
gtgactttcacaaataaagccgctagggaaatgaaagaacggattcaaaagctgtttgcg
gaagaagaagcaatcaaacaacacggaacgaagtttgatttattgacggaatatcaacag
acgcaactgcgatcgcaagtttaccgcgaaaccatcaaagatttatggtgcggtactttt
cacagtctgttttctcggattctgcggtttgatattgagaaataccaagacgaaaaaggt
cggcggtggaataagaacttctcaatttttgatgaatctgatgctcagagtttggttaaa
gaaattgtgaccaaacagctaaacttagacgataagaaatttgaccatcgctcggtgcgt
tatgcaattagtaacgcgaagaaccaaggtttttcaccccaagattttgaacgcgaacaa
ccaaattatcgcggaagggtaattgctgatgtttataaccgttatcaagataagctagca
gaaaataacgctctcgattttgatgatttaattctgattcctactagactatttcagcaa
aacgaacaggtattaggttattggcatcgcaaattctgccatattttagttgatgaatat
caagatactaaccgcactcagtatgacttaattcgcttgttggtaactaatggcgaagat
agaaagagtgaatggaagtggaaaaatcgctcggtctttgttgtgggtgatgctgaccag
tcaatttactcttttagaatggctgacttcaccattttgcttgagtttcagaatgatttc
ggtgatggtttaccggatgcagacaccagaacaatggtgaagttagaagaaaactatcgc
tcttgtgaaaatattctgcaagcggctaatgaactgattgaaaataatacccaacgaatt
gataaaattctgagacctactagaggcgcaggtgagcaaatttattgccacaaagctgat
aatgaattagatgaagccgcgtttatcatcgatcaaattcgttctttagaatatcaaaac
cccgaattaaactggggaagttttgccatactttatcggacaaacgcccaatcgcgacct
tttgaagaacttttagtgaaatatcaaattccttacacagttgtggggggaatgagattt
tacgatcgcaaagaaatcaaagatgtgatcgcttatttaagagcgatcgcaaatcctgcg
gatactgtgagtttgttacgagtcatcaatactccccggcgtggtattggcaaaacaact
attgatgctttgattaacgcctcccagcaattagggacaactctctgggaaatactgtca
gacgatacttcagttaataccttagctggacgaggtgccaaatctgttaaagcctttgcc
gaaatgattagccgttggcaaggcgaaatcggcaccatgccagccgcagaaattgtccaa
ggtatattagaagactctggttatgtgcaagacttgctcagtcagggtacagacgaatcc
caagatagaatccaaaacgtccaagaactttacaacgctgtactgcaattccaagaagaa
aacgaagatgctaccctacaaggcttcttgcaaagtactgccttaagttccgatttagat
aatttaaaagaaggcaaaacagcagtttctttgatgactttgcacgcttctaaaggcttg
gaatttcccgtagtctttttggtgggattagaacagggactattccctggctaccgttcc
ttaagtgaccccgcatctttagaagaagaacgtcgcctgtgttatgtaggaattacccgc
gcccaagagaggttatatttatcacacgctcgtgaacggaggctttacggttcgcgtgaa
cctgcagtgcgatcgcaatttttggacgaattaccagaagaattactagctaacggtcgc
agaggtcgtcaaacttatactaaacctgctaccgttaccaatggtaatggtaatggtaag
cagaattggcaagtaggcgatcgcgttttacataagtcttttggagtaggcgaaatcact
catgtatttggggatgggcacaagctttctgtagcaattaaatttgctaatttgggacaa
aaaattattgaccccagagtagcgcagttacaaaaagtagattattga
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