Nostoc carneum: NIES2107_10330
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Entry
NIES2107_10330 CDS
T10358
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ncw Nostoc carneum
Pathway
ncw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIES2107_10330 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncw03019
]
NIES2107_10330 (recQ_2)
03400 DNA repair and recombination proteins [BR:
ncw03400
]
NIES2107_10330 (recQ_2)
Enzymes [BR:
ncw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES2107_10330 (recQ_2)
Messenger RNA biogenesis [BR:
ncw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NIES2107_10330 (recQ_2)
DNA repair and recombination proteins [BR:
ncw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NIES2107_10330 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ASL_C2
Motif
Other DBs
NCBI-ProteinID:
BAY29192
LinkDB
All DBs
Position
complement(1291496..1292455)
Genome browser
AA seq
319 aa
AA seq
DB search
MNQIGTTYWNAVLNTFKKIWGYDNFRPPQGEIVSSLLAGKDALIIMPTGGGKSICFQLPA
LLQTGLTLVVSPLVALMENQVQELRQLNLSAALLHSELPSSQRRLTLQALAQNKLRLLYL
SPETLLSQPVWEKLCQPQLQINGLILDEAHCLVQWGETFRPAYRRLGAVRSALLKSKPPG
SKISVAAFTATADPLAQKIIASVLQLQQPDIYRLNPYRPNLHLNVCIAWTPKGRKQKLVR
FIQNRQQQAGLIYVRTRRDSENLAAWLAEMGYATASYHAGLSATERRAVEASWLGGKIPF
VVCTCAFGMGINKPDVRKQ
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaataggaaccacttattggaacgcagtccttaatacttttaaaaaaatttgg
ggttatgacaattttcgtcccccacagggtgaaatagtcagcagtttattggcaggaaaa
gatgcgttaattatcatgcctacaggtggaggtaagtcgatttgttttcaacttccggca
ctgctgcaaacaggattgactttggtagtttcgccgttagtagcattgatggaaaaccaa
gtacaagaactgcgccagctaaacttaagtgcagcacttttacatagcgaactaccttca
tcccaacgtcgcttaactctgcaagcattggcacaaaacaaactcagattattgtattta
tcgccagaaactttactcagtcagcctgtgtgggaaaaattgtgtcaaccacaattgcag
attaacggtttaattttggacgaagcccattgtttagtgcagtggggtgaaacatttcga
ccagcttatcgcagattaggggcagtgcgatcggcattgctgaaatcaaaaccacctgga
agcaaaattagcgtggcagcttttacggcgacggctgaccctttagcgcaaaaaattatt
gcctcagttttacaattacaacaacccgatatttaccgcctcaatccctaccgtccaaat
ctgcatctcaacgtctgcatcgcttggactcccaaaggtagaaagcaaaaattagtcaga
tttattcaaaatagacagcaacaagctggattaatctatgtccgcacccgcagagatagc
gagaatttagcagcttggttagcagagatgggttacgccacagctagttatcatgctgga
ctgagtgccacagaacgccgtgctgtagaagccagctggttaggtggtaaaataccattt
gtggtttgtacctgtgcatttggcatggggattaacaagcctgatgtgcgaaaacaatag
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