Nostoc carneum: NIES2107_18620
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Entry
NIES2107_18620 CDS
T10358
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ncw Nostoc carneum
Brite
KEGG Orthology (KO) [BR:
ncw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncw03032
]
NIES2107_18620
03400 DNA repair and recombination proteins [BR:
ncw03400
]
NIES2107_18620
Enzymes [BR:
ncw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NIES2107_18620
DNA replication proteins [BR:
ncw03032
]
Prokaryotic type
DNA Topoisomerases
NIES2107_18620
DNA repair and recombination proteins [BR:
ncw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIES2107_18620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
TPD52
DNA_ligase_ZBD
Toprim_2
zf_Tbcl
Motif
Other DBs
NCBI-ProteinID:
BAY30018
LinkDB
All DBs
Position
complement(2302061..2304244)
Genome browser
AA seq
727 aa
AA seq
DB search
MPKRLLVVESPGKVKKLSQILGSEWIVRASCGHIRELSNEGEDSLGFTMEGSNVQCRYVP
RDQQAKETIQQLKAAVKQVQEVVLATDPDREGETIAWHLKEALGLRQPKRVVYTEITEAA
VRTAIAHPRELDTNLVGAGLCRDCLDKLVGYKGSPLVWALNNGAKSVGRVQSATLHLICQ
REREIQTFVPQDYWSVWVDYAEGFRAFYKGMVNAPKEAAKEETEVNDDAAVNSTQAPEST
RVLAEAEANRLVDEARRHPHKVVQFEGKIVNRQPPPPFITSTLQQAAGSRLRFAPEKTMQ
VAQKLYEAGLITYMRTDSVMLSPEFCDSARKWLEQNDPQNVPQKTTRHRSNKTAQEAHEA
IRPTDVFRPSVQLRLELTEDEFNLYVLIWKRAIASQCRAAQLRKTLVITQSGDILWQARG
QVVEFLGYARYWPNLSKDSILPNLQQGQMLTLENAGHEKKQTQPPPRYSEPKLVQLMERK
GIGRPSTYSPTIATLKKRGYVQLAKESLQPTTLGLEVDAFLQKALPDLLETEFTAKMEDA
LDAIASGKQQWQQYLTKWNENYFAPALAKAKTIVVSAATGVKNYPVAERKFETSRTRCPQ
CKNHLAKIKSSKVKKKYFLKCVSGCENIVLFWSEYSKSWEAPRSQAAKETQETKEATPQK
SKAAITKYSCPVCHKPLEEYSYIKDGQNKKMLRCSNPQSRNDKKHKDVAYFSTQKGWWSP
KLGDLKG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgccttctggtggttgaatctccgggtaaagtgaaaaagctcagtcaaatt
ctcggttctgagtggattgtacgcgctagttgcggtcacattcgggaactgagtaatgag
ggtgaggattccctgggctttacgatggaagggagtaatgtgcagtgtcgctatgtcccc
cgggatcaacaggctaaggaaacgattcaacagttaaaggcggcggtaaagcaagtacag
gaagttgttttagctacagatccagatagagaaggggaaaccattgcttggcatctcaag
gaagctttgggactgaggcaaccaaaacgggtggtgtacactgaaattacagaagcagca
gtcagaactgcgatcgcacatcctagagaattagatacaaatttggtaggggcgggattg
tgccgcgattgtttagataagctggtaggttataagggcagtcctttagtttgggcgttg
aataatggggcgaaaagtgtcgggagagtccaaagtgctaccttacacttaatctgtcag
cgagagagagaaattcaaacttttgtcccccaagattattggagtgtgtgggtagattac
gctgaaggcttccgcgctttctacaaagggatggtgaatgcgcctaaggaagcagcgaag
gaagaaacggaagtgaatgacgatgcggcggtgaatagcacccaagcgccagaatctacc
cgtgtacttgcagaagcggaagcaaatcgcttagtagatgaggcgcgccgccatcctcac
aaagtggtgcaatttgaaggcaaaattgttaaccgccaaccaccaccaccatttatcacc
tctactttacagcaagctgcgggttctcgattgcgctttgccccagagaagacaatgcag
gtagcacaaaagctctatgaagctgggctaattacttatatgcgaacagattcggtgatg
ctcagcccggagttctgtgatagcgctcgtaagtggttggagcaaaacgatccgcaaaat
gtcccccagaagactaccagacatcgcagtaacaaaactgctcaggaagcccatgaagcg
attcgccctacagatgtgtttcgtccttctgtgcagttacgcctagaactaaccgaagat
gagtttaacttgtatgtcttaatttggaaaagagcgatcgcctcccaatgtcgagccgca
caactgcgaaaaaccctagtaattacccaatctggggatatactctggcaagcaagaggg
caagttgtggagtttttaggttatgcgcgctactggcctaacctgagtaaagatagtatt
ttgcctaatttacaacaagggcaaatgctaactttagaaaatgctggacatgagaagaaa
caaacccaaccgccaccccgctacagcgaacccaaattagtccagttaatggagcgtaaa
ggcattggtcgtcctagtacctattctcccacaatcgccaccctgaaaaaacgcggatat
gtgcagttagccaaagagagtttacagccgacaacattggggttagaagtcgatgccttt
ttacagaaagccttacccgacttattagaaaccgaatttactgccaaaatggaagatgcc
ctagatgcgatcgcatctgggaaacaacagtggcagcaatatctcaccaaatggaacgag
aattattttgcaccagccttagccaaagccaaaaccatcgtcgtgagtgcggcgactggg
gtgaaaaattatcctgtggctgaacgcaaatttgagacttcccgcactcgttgtccacaa
tgcaagaatcatttagccaaaattaagagcagtaaagttaaaaagaaatatttcctcaaa
tgcgtcagtgggtgcgagaacatcgtgctgttttggagcgaatatagcaaaagttgggaa
gcaccccgttctcaagccgccaaggaaacgcaggaaacgaaggaagcaactccgcaaaaa
tccaaagctgcaattaccaaatactcctgtcccgtctgtcacaagcctttagaagaatac
agttatatcaaagatggacagaacaagaaaatgctgcgctgttccaatccccaatcccgc
aacgataaaaaacacaaagatgtcgcctacttcagcacccagaaaggttggtggagtccg
aagttaggggatttgaaggggtga
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