Nostoc carneum: NIES2107_25590
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Entry
NIES2107_25590 CDS
T10358
Name
(GenBank) RNA-binding S1 domain-containing protein
KO
K06959
protein Tex
Organism
ncw Nostoc carneum
Brite
KEGG Orthology (KO) [BR:
ncw00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
NIES2107_25590
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Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
HHH_3
HHH_9
Tex_central_region
S1
YqgF
S1_RRP5
HHH_7
OB_RRP5_4th
T2SSK
baeRF_family10
HHH
Motif
Other DBs
NCBI-ProteinID:
BAY30711
LinkDB
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Position
complement(3207524..3209686)
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AA seq
720 aa
AA seq
DB search
MLNIPQLLATELDLKPYQVQNALELLAEGATIPFIARYRKERTGEMDEVQLRNLSDRYTY
LTELEERKAVILNAIANQGKLTDELKAQITSSLQKTELEDLYLPYKQKRRTRATVAREKG
LEPLAEFIKSLNVKNSVSASLETEAAKYISETQGVKSAEEALKGASDILAEEVAEKAESR
AYIRDYLLESGVFSSRIKNEHPEGTTKFEMYRNYQAKVKHIAPHNILALCRGEAEGVLNF
EIAFDEDVVLSYLESQEIKTKVRAIRDFYQVMIKDAFNRLMKTSLMGEVIAEKKAYADFE
SIKTFETNLRELLLSAPAGMKPTLAIDPGFRTGCKVAVIDQTGKFLEYQAVFPHQAAEQR
TKAAQTLKNLIEKYKIELIAIGNGTASRETDEFVSQVLQAMERKPTKVMVNESGASIYSA
SKVALEEFPDLDITVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKKKLDE
TVESCVNYVGVDLNTASKELLTFVSGITPAVANNIVTYRNQNGAFKNRRQLLKVPKLGPK
AFEQAAGFLRIRNGENPLDNTAVHPESYSLVEAIASDLNVPLIQVTQIAAKLQKANLKKY
VTDTVGEPTLRDILSELEKPGRDPRAEFKYATFKEGITEIKDLQEGMELEGIITNVANFG
AFVDIGVHQDGLVHISQLADRFVDDPKKIVKVGQVVKVRVLEVNEKLKRISLSMKSVRQS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacattcctcaattactggcaactgaactagaccttaaaccttatcaggtgcaa
aatgcgctggaacttttagcagagggtgcaacaatcccttttatcgcacgctatcgaaaa
gagcgcaccggtgaaatggatgaagttcaattgcgtaatttatcggataggtatacatac
ttaacagaattagaagaaagaaaagcggtaattttaaatgcgatcgccaatcaaggtaaa
ctcactgatgaactaaaagcgcagattacttctagtttacaaaaaacagaacttgaggat
ttatacttaccatataaacaaaagcgacgcacccgcgcgactgtcgccagagagaaaggt
ttagaaccactggcagaatttattaaatcattgaatgtgaaaaattctgtgtctgcttct
ttagaaacagaagcagccaaatatatttcggaaactcaaggagtaaaatctgcggaagaa
gcactcaaaggcgcatctgatatcttagcggaggaagttgccgaaaaagccgaatcaagg
gcatatattcgggattacttattagaatcgggtgtattttcttcgcggattaaaaatgaa
catccggagggaacaacgaaatttgaaatgtaccgcaactatcaagctaaggtgaaacat
attgcacctcataatatcctggctttgtgtcggggtgaagcagagggagtattaaatttt
gaaatcgcctttgatgaagatgtagtactttcatatctcgaatctcaggaaattaaaacc
aaagtccgcgctattcgcgatttttaccaagtgatgatcaaagatgcatttaatcgcttg
atgaaaacttctttaatgggagaagtaatagccgaaaagaaagcctacgctgattttgag
tcgattaaaacctttgaaacaaatttacgggaattgctattatctgcacctgcggggatg
aaaccaaccttggcaattgatcctgggtttagaactgggtgtaaagtagcagtaattgac
caaacaggaaaatttttggaatatcaagcggtatttccccatcaagcagcagaacaacgc
actaaagctgcacaaactctcaaaaatctgattgaaaagtacaaaattgagttaatcgcc
attggtaacggtacagcttcccgtgagactgacgagtttgtctcccaagtactgcaagct
atggaacgcaaaccgacaaaggtaatggtgaatgaatcgggtgcatctatatattctgct
agtaaagtagctttagaagaatttcccgatttagatattaccgtgcgtggtgctattagc
atcggtcggcggttgcaagatcccttggcggaactggtgaaaattgatcccaaatccatc
ggggtgggacaatatcagcacgatgttgaccagaagttgctgaagaaaaagttggatgaa
actgtagaaagctgcgtcaactatgtaggtgtagacttaaacacggcttctaaagaactt
ttaacctttgtctcgggaattacgccagcagttgccaataatattgttacctatcgcaac
cagaacggagcctttaaaaatcgccgccaactgttaaaagtgccaaaactagggccaaaa
gcctttgaacaagcagcagggtttttgcggattcgcaacggtgaaaatcccttagataat
acagctgtgcatccagagagttattccttagtagaagcgatcgcatctgatctcaacgta
ccattaattcaggtaacccaaatcgccgcgaaactccaaaaggctaacttgaaaaaatac
gtcaccgatactgtaggcgaaccaacactgcgcgatatcctcagcgaactcgaaaaacca
ggtagagatcctcgtgctgagtttaaatatgccaccttcaaagaaggaatcacagaaatc
aaagatttacaagaggggatggaattagaaggtatcatcaccaatgttgccaacttcggt
gcgtttgtagatatcggcgtacatcaagatggcttagtacacatctcccaattggcggat
agattcgttgatgatcccaaaaagattgtcaaagtcggacaagttgtgaaagttagagta
ctagaagtcaatgagaaattgaagcgaattagtttgtcgatgaaatccgtaagacaaagc
tag
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