Nostoc carneum: NIES2107_32060
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Entry
NIES2107_32060 CDS
T10358
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
ncw Nostoc carneum
Pathway
ncw02010
ABC transporters
ncw02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ncw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES2107_32060
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
NIES2107_32060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncw02000
]
NIES2107_32060
Transporters [BR:
ncw02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
NIES2107_32060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
GSH-S_ATP
Skp1
Motif
Other DBs
NCBI-ProteinID:
BAY31347
LinkDB
All DBs
Position
3989053..3990045
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AA seq
330 aa
AA seq
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MNVNRIAIVASLFSIVSTTLSGCISPNVSRNSTNAIGANGNHQGKLKAVGVTVGDLSNPF
FVLMGKGAESEAKKIGGNDVRVTVVSSGYDLNQQFNQIENFVAANTDLIVLNAADSKGIR
PAVDKARQAGTVVIAVDTAVDAQVDATVTTNNLQAGEVACQYIADRLKGKGNVVIVNGPP
VTSVIQRVNGCENTLAKYPNIKILSKNQNAEGSRDGGLRVMGDLLVTFPKIDAVFAINDP
SGVGVDLAANQAKRKEFFIVGVDGAPEAINAIASKKSLYAATATQNPRGMTQKAVQVGND
ILQGKKPSNPNILIPVKLITQDNVSTFPGW
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaaacaggattgcaatagtagccagtctattcagtatcgttagcacaaccctg
agtggctgtattagtcctaatgtttctcggaatagcacaaatgctatcggtgctaacggc
aatcatcagggaaaattaaaagccgttggtgttaccgttggcgatttaagtaacccgttc
ttcgtgctgatgggtaaaggtgctgaaagcgaagccaagaaaattggcggtaatgatgtc
agagtcactgtagtttctagcggctatgacctcaaccagcaatttaaccaaattgaaaat
ttcgtggctgcaaatactgacttaattgtcttgaatgcggctgatagtaaaggtattaga
cctgcagtcgataaagcaagacaagcaggtacagttgtaattgcggtagatacagcagtt
gacgctcaagttgatgccacagttaccaccaataatttgcaagctggagaagttgcttgc
caatatattgccgatcgcctaaaaggtaaaggtaatgtcgtcatcgtcaatggcccgcca
gttacctctgtaattcagcgagtcaatggttgtgaaaataccttagccaaatatcccaat
attaaaattctctcaaaaaaccagaacgctgaaggtagcagagatgggggattgagagtc
atgggcgatttactagttaccttccccaaaatagatgcagtctttgccattaacgacccc
agtggcgtaggtgtagatttagcagcaaaccaagccaaacgcaaagaatttttcatcgtg
ggagttgatggtgcgccagaagcaattaatgcgatcgcatctaaaaaaagcctttatgca
gcaacagccacccaaaaccccagaggaatgacgcaaaaagccgttcaagtaggcaatgac
attttacaaggtaaaaaacccagcaatcctaatattctgattcccgtgaagttgattact
caagataatgtcagcaccttcccagggtggtaa
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