Nostoc carneum: NIES2107_45110
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Entry
NIES2107_45110 CDS
T10358
Symbol
clpB
Name
(GenBank) endopeptidase Clp ATP-binding chain
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ncw Nostoc carneum
Brite
KEGG Orthology (KO) [BR:
ncw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ncw03110
]
NIES2107_45110 (clpB)
Chaperones and folding catalysts [BR:
ncw03110
]
Heat shock proteins
HSP100
NIES2107_45110 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
TniB
AAA_18
UVR
AAA_14
Mg_chelatase
IstB_IS21
RNA_helicase
RuvB_N
AAA_28
NACHT
Zeta_toxin
AAA_25
ATPase_2
AAA_7
AAA_3
AAA_24
DNA_pol3_delta2
Torsin
NBD_SMAX1
DAHP_snth_FXD
Motif
Other DBs
NCBI-ProteinID:
BAY32621
LinkDB
All DBs
Position
5521274..5523742
Genome browser
AA seq
822 aa
AA seq
DB search
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR
IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA
ARVLENLGVDLSKVRTQVIRMLGETAEVTQGGPSGRTKTPTLDEFGSNLTQMATDNKLDP
VVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVT
LDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILK
PALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEQH
HKLKISDEALVAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDKELR
QILKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIAQSKTNASGNEGLEPVVTEEDIAHI
VASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIA
SFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEG
GQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSN
IGSKVIEKGGGGIGFEFADDASESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLSK
AEVTEIADIMLKEVFGRLTEKGITLEVTDRFKDRLIQEGYSPSYGARPLRRAIMRLLEDS
LAEEILSGRIKDGDTALVDVDENGNVQVSSQQRRELLSQGAE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacgcttcacagaaaaagctattaaggtaatcatgctggcccaagaagaggcc
cgccgtttaggccacaatttcgtcggcactgaacagatcctcctgggtctgattggtgaa
gggacgggagttgcggccaaggtgctgaaatcaatgggtgtcaatctcaaagatgcccga
attgaagtagaaaaaatcataggacggggttcgggctttgttgctgtggaaattcctttt
acgccacgggcaaagcgggttctggaactatctttagaagaagcgcgccaattaggccat
aactacattggcaccgaacatctgctgttgggcctgatccgagaaggggaaggtgtggca
gccagggtgttggaaaacctcggcgtggatctatcgaaggtacgaacccaagtcattcgg
atgttgggcgaaacagctgaagtcacccaaggaggcccctctgggcgcaccaaaactcca
accttggatgaatttggttccaacctcacccaaatggcaaccgacaacaaactcgatcct
gtggtgggacgcgccaaagaaatcgagcgagttatccaaatattgggtcgccggacaaaa
aataacccagtgctgataggtgaaccaggggttggtaaaacagcgatcgctgaaggttta
gcgagccgcattgccaacaaagatgtccccgacatcctggaagacaagcgcgtagtcacg
ctggatattggtttacttgtagccggaaccaagtatcggggtgaatttgaagaacgcctg
aagaaaatcatggacgaaattcgtcaggcgggtaatgtaattctcgtcattgacgaggta
cacaccctgattggtgcaggtgcagccgaaggcgcaatcgacgcggcgaatatcctcaag
ccagctttggctagaggtgagttgcaatgtattggtgcaaccaccctagatgaatatcgc
aaacacatcgaacgggatgcagcattagagcgccgcttccaaccagtaatggtaggcgaa
ccctcagttgatgaaacaattgagattctctacggtctgcgcgatcgctacgagcaacac
cacaaactgaaaatttccgatgaagccttggtggcggcagcgaaattgtccgatcgttat
attagtgatcgctatctgccagataaagccatcgacttaatcgacgaagcaggttccaga
gtccggttgattaactcccaattgccccccgcagccaaagagttagacaaagaactgcgc
caaatcttaaaagaaaaagatgatgcagttcgctcccaagacttcgaccgcgctggagaa
ctgcgcgatcgcgaaatggaaatcaaagccgaaattcgcgcgatcgctcaaagcaaaacc
aatgcttctggtaacgaaggtttagaacccgtagttacagaagaggacattgcccacatc
gtcgcatcctggacgggagttccggtgaacaagctcaccgaatccgaatccgagaagctg
ttgcacatggaagacaccctacatcagcgcctaattggacaagaagacgctgtgaaggca
gtttcccgagcaattcgccgcgctcgtgtcggtttgaaaaatcccaatcgacccatcgcc
agctttgtcttctcaggccccaccggcgttggtaaaaccgaattggcgaaatccttggct
tcttacttcttcggttccgaagaagcaatgattcgcctagatatgtcggaatatatggaa
cgtcacaccgtcagcaaactgatcggttcacctccaggttacgttggctataacgaaggc
ggtcagctaaccgaagcagtaagacgcagaccttataccgtggtgctattcgacgaaatc
gaaaaagctcaccccgatgtcttcaacatgctgctgcaaatcttagaagacggtcgctta
accgatgctaaaggtcgcaccgtagactttaagaacactctgttgattttgacatctaac
atcggttccaaggtaattgaaaaaggtggtggcggtatcggcttcgagtttgcagacgat
gctagcgaatcgcaatacaaccgtattcgctccttggtgaacgaagaactgaagcaatac
ttccgtccagagttcctcaaccgtttagatgaaattatcgtcttccgtcagttgagcaag
gccgaagttacagaaatcgccgacatcatgctcaaagaagtatttggtcgcctgaccgaa
aaaggtattaccttagaagtcaccgaccgcttcaaagaccgcctcatccaagaaggctac
agcccgagctacggcgcacgaccattacgtcgagcaattatgcgcttgttagaagatagc
ttggctgaagagattctctctggtcgcattaaagatggcgatacagccctggttgatgtt
gatgaaaacggtaacgttcaagtcagttctcaacagcgtcgggaattattatcccaaggt
gctgagtaa
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