Nostoc carneum: NIES2107_45250
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Entry
NIES2107_45250 CDS
T10358
Name
(GenBank) ABC transporter, transmembrane region
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ncw Nostoc carneum
Pathway
ncw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ncw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES2107_45250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncw02000
]
NIES2107_45250
Transporters [BR:
ncw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES2107_45250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
AAA
AAA_21
AAA_16
AAA_30
AAA_15
AAA_19
AAA_23
T2SSE
Zeta_toxin
ABC_membrane_3
DEAD
nSTAND3
AAA_29
ABC_ATPase
TsaE
NB-ARC
NMT1_3
cobW
RsgA_GTPase
DO-GTPase2
AAA_7
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
BAY32635
LinkDB
All DBs
Position
complement(5542588..5544369)
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AA seq
593 aa
AA seq
DB search
MRGIGPVVAPEQQASNQLSTLRRFLQYLRPYRKEIPIALTLVLIGASTQAIGPFLLGWSV
DHLIAQGNLSGLLLLLALLGLIYALGVWAIRGQIMRVGWIMQRLLAQLRQDIFTKIQSLP
LSFFDRSEAGDLMSRLLNDVNTVNQAFGQTIAQMLGNTFSLVGIVIAMLTINLQLGLLSN
LVVPLMILTTSLFARWARARFRVTRQTIGELSAKLEEDIGSVREAQAFNRVHINIAEFDI
LNAANRDANVEAVAITAAFLPSIDFLNTLATAGVLAYGGYLAVTGGATVGVVTSFLLYVQ
QFFRPIQILSQFYTQAQSAFAGLERIFLLLDEPSQLNDAPDAIEMPPIQGEVTFEDVKFG
YNPEQLVLKGVNLHAYPGQMIALVGPTGSGKTTIINLILRFYDVSDGAVKIDEIDVRTVT
QASLRRQIGIVLQDNILFSGTVAENIAFGVPNATQADIEAAAQRANVHEFITSLPQGYST
QLGERGAPLSQGQRQLISIARAILINPRILILDEATSSIDTRTEALVQSAIARLLQGRTS
FVIAHRLSTVTQASQVLVIQQGQIVEQGTHAELIAKQGVYANLYALQLGATAT
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtattggcccagttgttgcgcccgaacaacaagcaagtaatcaactctcaacc
ttgcggcgctttttacaatacttgcgaccttaccgcaaagaaatccccattgccttgaca
ttagttctcattggtgcatcaactcaggcgatcgggccatttctacttggctggtcagtc
gatcacctaattgcccaaggtaatttatcaggattgctcttgctattagccttactaggg
ctaatttatgcccttggtgtctgggcaattcgcggtcaaattatgcgagttggctggatt
atgcagcgcttgctggcgcaactgcgacaagatattttcaccaaaattcaaagtttacca
ctgagcttttttgaccgcagtgaagcaggcgatttaatgagccgtctgctaaatgatgtc
aacactgttaatcaagcatttggtcaaacaatcgcccaaatgctaggcaacacttttagt
ttggtgggcattgtgattgccatgctgacaatcaatctgcaacttggcttgttaagcaac
ctagttgtaccactgatgattttaaccaccagcttgtttgcacgttgggcaagagcgaga
tttcgtgtcaccaggcaaaccatcggcgaactttccgccaaattggaagaagatattggt
agtgtgcgggaagcacaagcttttaatcgtgtacatatcaacattgccgagtttgatatt
ctcaacgctgctaatcgggatgccaatgtcgaagctgtagctattactgcggcattttta
ccatcaattgattttctcaatactttagcaaccgcaggtgttctcgcttatggtggctat
ctagctgtgactggtggcgcaacagtgggtgtggtgacttcctttttactgtatgtgcaa
cagtttttccgccctattcaaattctcagccagttttacactcaagctcagtctgctttt
gccggattagagcgaattttcctgcttttagatgaaccatcacaactcaatgatgcaccc
gatgccattgaaatgccaccaattcaaggagaggtgactttcgaggatgtaaaatttggc
tataacccagagcaattagtacttaaaggtgtaaatttacacgcctatccaggacaaatg
atcgccttagtcggccctactggttctggcaaaaccacaattattaacctgatattgcgc
ttttatgatgtctctgatggtgcagtcaaaattgatgaaattgatgtgcggactgtgaca
caagctagtttgcgccgtcaaattggtattgtcctgcaagataatattttatttagcggt
actgtagcggaaaatattgcttttggtgttcctaatgctacccaagcagatatcgaagct
gcagcgcaaagggcaaatgtgcatgagttcatcacctcattaccccagggttattcaact
caattaggcgaacggggtgcgcctctcagccagggacagcgccaactaattagtattgcc
cgtgcgatattaattaacccgcgaattttgatacttgatgaagccaccagcagtatagac
acccgcaccgaagcactagtacaaagtgcgatcgcacgtttgttgcaagggcgtaccagc
tttgtcattgctcaccgtctcagtactgtaactcaggcttcccaggtgttagtcattcag
caaggacaaattgttgaacaaggaactcatgcagaactaattgctaaacaaggtgtctat
gcaaacttgtatgctcttcagttgggtgcaactgctacataa
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