Nostoc carneum: NIES2107_47300
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Entry
NIES2107_47300 CDS
T10358
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ncw Nostoc carneum
Pathway
ncw00061
Fatty acid biosynthesis
ncw00071
Fatty acid degradation
ncw01100
Metabolic pathways
ncw01212
Fatty acid metabolism
ncw02024
Quorum sensing
ncw04146
Peroxisome
Module
ncw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ncw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NIES2107_47300
00071 Fatty acid degradation
NIES2107_47300
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NIES2107_47300
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIES2107_47300
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ncw01004
]
NIES2107_47300
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncw04147
]
NIES2107_47300
Enzymes [BR:
ncw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NIES2107_47300
Lipid biosynthesis proteins [BR:
ncw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NIES2107_47300
Exosome [BR:
ncw04147
]
Exosomal proteins
Exosomal proteins of breast milk
NIES2107_47300
Exosomal proteins of breast cancer cells
NIES2107_47300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAY32836
LinkDB
All DBs
Position
5794074..5796047
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AA seq
657 aa
AA seq
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MSKTQSAAIYLSNISEAERSALKRLQDYTHINAIPEIWPLAAKSFGDTVALHNPHAKPEV
VITYKQLAELIQKFAAGLQVLGVKAGDRLSLIADNSPRWFVADQGIMTAGAVDAVRSSQA
EKEELLFIVANSGSTGLVLEDLKTLQKLRDRLNDLPVQFVILLSDETPPEDSLKILNFSQ
VLEIGANNALQPVEYNQDNLATLIYTSGTTGKPKGVMLAHSNLIHQITTMGTVVQPHIGD
VALSILPSWHSYERTVEYFLLSQGCTQIYTNLRAVKNDLKNRKPHFMVAVPRLWESIYEG
AQKQFREQPANKQRLINFFFEKSDRYIKAKRIAEGVSLEHLESSALEKLTAKIQAAALFP
LHALGERLVYAKVREATGGRIKQVISGGGALPKHIDMFFEIIGVEILQGYGLTETSPVTN
VRRPWHNVRGSSGQTLPATETKIVDPETRKPLAIGERGLVLLKGPQIMQGYYQNPEATAK
AIDADGWFDSGDLGWLTPQNDLVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIML
VGQDQRSLGALIVPNLEALVKWAETQNIDLSKPNEDVTASVSQKIDLESKIIQELFRKEL
NREVQNRPGYRADDRIGPFKLIPEPFSIENGLMTQTLKIRRHIVSERYRDIVNAMFA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaactcaatcggcggcgatttacttatctaatattagtgaagcagaacgttca
gcattaaagcggttacaagattacacccatatcaatgccataccagaaatttggccctta
gcagccaagtcatttggggatacagtggcgctgcacaatccccatgcgaaaccagaggtg
gtgattacttacaagcagttagcagagctaattcaaaaatttgcggctgggttacaggtt
ttaggagtcaaagcaggcgatcgcctgtcgttaattgccgataatagtcccaggtggttt
gtagccgatcaaggaatcatgacggctggcgctgtggatgcggtgcggagttcccaagcc
gaaaaggaagaattactgtttattgtggctaatagcggcagtacagggctagtcctagaa
gatttaaagacactgcaaaaattgcgcgatcgcctcaacgatttacccgtgcaatttgtg
attttgctttccgatgagacaccaccagaagatagtctgaaaatcctcaatttttcacaa
gtcctagaaattggcgctaacaatgccttgcaaccagttgagtacaatcaagacaattta
gccacactcatttatacttctggtactacaggcaaacccaagggtgtgatgctagctcat
agcaatttaatccatcaaatcacaactatgggtacagtagtgcagccccacatcggtgat
gtggctttgagtatccttccgagttggcatagctatgaaagaaccgtagagtatttctta
ctttctcagggttgtactcaaatttatactaacttgcgtgccgtcaaaaacgatttaaaa
aaccgcaaaccccattttatggtagctgtaccgcgcttatgggaatcaatttatgaagga
gcgcaaaaacagtttcgcgaacaaccagctaataagcaacgcctgatcaactttttcttt
gaaaagagcgatcgctatattaaagccaagcgcattgctgaaggagtcagtttagaacat
ttggaatcctcagcattagagaaattaaccgcgaaaatccaagctgcggctttatttccc
ctccatgccttgggagaacggctagtttatgctaaagtccgtgaggcaacaggagggcga
atcaagcaagtcattagcggtggtggcgcacttcccaagcacattgatatgttttttgaa
attattggtgtagaaattttgcaaggctatggcttaaccgaaacatctcctgtaactaat
gtgcgccgcccttggcataatgtccgcggttcatccggtcagacattacccgcaacagaa
actaaaattgtagatccagagactcgcaaacctctagcaataggggagcgaggcttggtg
ttattgaaggggccgcaaattatgcaaggctattaccaaaatcccgaagcgacagcgaaa
gccatcgacgctgacggttggtttgatagcggcgatttgggttggttaacaccacaaaat
gacttagtactgacaggcagggcaaaagataccatcgtcttaactaatggggagaatatc
gagccgcaaccaatcgaagacgcgtgtttgcgatcgccctacatcgatcagattatgcta
gttggtcaagatcagcgtagccttggtgcattgattgtccccaatttggaagcattagta
aaatgggcagaaactcaaaatattgatttgagtaaaccaaatgaagatgttaccgcctca
gtcagtcaaaaaatagacctggagagtaaaataatccaggaattatttcggaaggaattg
aatcgggaagtgcaaaatcgtccaggctatagagcagatgaccgcatcggcccatttaag
ctcattccagagccgttttctattgaaaatggtttaatgacacaaacactaaaaatccgg
cgacatatcgtcagcgaacgctatcgcgatattgttaacgccatgtttgcttga
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