Nostoc carneum: NIES2107_48160
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Entry
NIES2107_48160 CDS
T10358
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ncw Nostoc carneum
Pathway
ncw02020
Two-component system
ncw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ncw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NIES2107_48160
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIES2107_48160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncw03000
]
NIES2107_48160
Transcription factors [BR:
ncw03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
NIES2107_48160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR
HTH_24
TrmB
MarR_2
GntR
Penicillinase_R
HVO_A0261_N
HTH_IclR
Rio2_N
HTH_36
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
BAY32922
LinkDB
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Position
complement(5891399..5892097)
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AA seq
232 aa
AA seq
DB search
MEDRFSLQTPANPWMLSTPFFQGLPELVVETALTHFVTRTHPPNQVILLENDWGGSVYFI
VDGWVKIRTYNLEGKEVTLNIIGKGELFGEMAALDEVPRSTDVITLTPTVIGSMPSQDFV
KLLQTEPMAGMRLAQLMARRLRQVNRRLRLRESDSQSRVADTLLFLAEGQGKKAQTGTEI
PNLPHRELSSLSGLARETVTRVLTRLEKKGLIKRDQDIICIPDLTALERMIV
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggaagaccgatttagtctgcaaacacctgccaatccctggatgctctcgactcccttt
tttcaagggctaccagaattggttgtggaaacagccctcactcattttgtgacccgtact
catccacccaatcaagtgattttactggaaaatgattggggtggttcagtatactttatt
gttgatggttgggtcaaaattcgtacctacaatttagaaggcaaagaagtaacattaaat
attattggcaaaggtgaactgtttggggaaatggcggcgctagatgaagtacctcgctct
actgatgtcattaccctcacgcctactgtcattgggagtatgccatcacaggactttgtc
aagttacttcaaacagagcctatggcaggaatgcgattagctcaactgatggcgcggcgt
ttgcgacaagtcaatcgcagactgcgcttgcgggaatctgatagccaatcacgggtggct
gatactttgctgtttttggcggaaggacagggaaaaaaggcacaaacaggcacagaaatt
cctaatttgccacatcgagaactcagcagtttaagtgggttggcaagagaaacagtgaca
cgagtcttgacaaggctagaaaagaaaggcttgattaaacgggatcaagatattatttgt
attcctgatttgactgccttggaaagaatgatcgtttaa
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