Nostoc carneum: NIES2107_50980
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Entry
NIES2107_50980 CDS
T10358
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
ncw Nostoc carneum
Pathway
ncw02010
ABC transporters
ncw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ncw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES2107_50980
03070 Bacterial secretion system
NIES2107_50980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncw02000
]
NIES2107_50980
02044 Secretion system [BR:
ncw02044
]
NIES2107_50980
Transporters [BR:
ncw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES2107_50980
Secretion system [BR:
ncw02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES2107_50980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
SMC_N
AAA_22
Peptidase_C70
Peptidase_C39_2
AAA_16
AAA_29
NB-ARC
AAA_30
nSTAND3
RsgA_GTPase
CobD_Cbib
Mg_chelatase
TsaE
Motif
Other DBs
NCBI-ProteinID:
BAY33203
LinkDB
All DBs
Position
complement(6211967..6215077)
Genome browser
AA seq
1036 aa
AA seq
DB search
MPSEFSPAKLAEQLTQILGANISEQELAESVQAIVIHEPKIAKLFWRSAGAAPGIYLVLN
GKVRLLDTADNLIATLSVGGIFGQLTLFPESDFSPYNARASTNLKLGYIKGEILQNLISK
YPNIQEHLHRQAEAWELLMSCYENSPAPRIALVEEMLKVLALFQRHNLEIGYLPPQLTQE
CKLWLLRSGELLHSDGRTLTPGKIYTPSNRSHRGTGWQAIQPTIIYTLSHSAWQTALQHL
PQLSEFVTADAKDSEDEDEEDTVTEDGESIRSRDDFSVSSRPSAYSFPTSSQPSKRKPPK
RRNYFPNPKVTFTHWWGRITKRYPFFQQQSASDCAAACLVMIGRYWGKNLSLNRLRDIAN
TSRSGASLRGLAAAAESIGFSTRPVRASFDKLAQQPLPAIAHWEGKHYIVVYEISKKRVI
VGDPAIGQRTLTPREFQARWTGYALLLQPTSELKESEEANTPFWQFFELVKPHWVVLLEV
VVASICIQVFGLVTPLLTQLLLDRVIVQGSTLTLNAVGLGLLIFGLFRVAINGLRQYLLD
HTANRITLSMIVGFIKHTFRLPLSFFESRYVGDIISRLQENHKIQRFLTGESLSIFLDLL
TVFIYIGLMFWYSWKMALLVLVILPPILLVTFLATPFLRRISREIFNAIAAESSYLIEAL
TGISTIRSMSIEQTVRWKWEERLHQSIKKGFSGQIISNQLQIASASIETVATTSLLWFGA
WLVIQNQLTIGQLIAFNMLLGNVIRPFQRLAVLWNQLQEVMISSERINDVLETEPEEDLQ
AAPKQFLPRLRGYIRFDNVTFRYHPESELNVLENISFEVKPEQTVALVGRSGSGKTTLSK
LILGLYPATEGKVLIDNYDLTSVALKSLRSQIGVVDQDTFLFGGTIRENISIAHPESTQE
EIIEAASLAGADEFIQQLPMGYETPIGEGGGLLSGGQRQRLAIARALLGNPALLLLDEAT
SHLDAESERIIQNNLKTITQGRTTLIIAHRLSTIRNADLILVLDKGALVESGNHEQLIKS
KGYYYYLNQQQLAQTV
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagaattttccccagcaaagctggctgaacaactcacccaaattttgggtgca
aatatttcagaacaggaattggcagaatctgtacaagcaatagtaatccacgaaccaaaa
atagctaagttgttttggcgttcagcaggtgcagcaccgggaatttatttagttttaaat
ggtaaagtacggctgctagatactgccgataatttaatcgctaccttgtccgtcggaggt
atatttggtcagctaactctatttcctgagtcagattttagcccttataatgctagagct
tctactaatttaaagttgggttatattaagggcgagattttacaaaatttaatcagcaaa
tatcccaatattcaggagcatttacatcgtcaagctgaagcatgggaattactgatgtca
tgttatgaaaattccccagcgccgcgaattgctcttgttgaggagatgttaaaagttcta
gcactatttcaacggcacaatctagaaattggctacttaccaccacaactaacgcaagaa
tgtaagttatggttgttgcgaagtggggaattactgcattccgatgggcgtactcttacc
ccaggcaaaatttatactccttctaaccgcagtcatcgaggtactggttggcaagcaatt
caacctacaatcatttacactctcagtcattctgcttggcaaacagcactgcaacattta
ccgcaattatcagagttcgtgactgctgatgctaaagactcagaagatgaggacgaggaa
gatacagttactgaagatggggaatcaatcagatctagagatgatttttctgtgtcctcc
cgtcctagtgcttattccttccctacctcatctcagccaagcaagagaaaaccccccaaa
cgccgcaattactttcctaaccccaaggtaacttttactcattggtggggaagaattacc
aagcgctaccccttctttcaacagcaaagcgcttccgattgtgcggctgcttgtttggta
atgattgggcgctattggggtaaaaacctgagtttaaatcggctgcgagatatagcgaat
actagccggagtggtgcatcattgcggggtttagctgctgctgctgaaagtattggcttt
tctaccaggccagtcagagctagttttgataaattagcacaacaaccgctacctgcgatc
gcacattgggaaggcaagcattacattgtcgtttatgaaattagcaaaaaacgggtgatt
gtaggtgatccggcgattggacaacgcacccttacgccgcgggaatttcaagctagatgg
actggctatgcattgttattacaacccacatctgagttaaaagaaagtgaggaagcaaat
acaccattttggcaattttttgagttagttaaacctcattgggtagtgttgctagaagtg
gtggtggcttcgatatgtattcaggtgtttggattggtgacaccactattaacccagcta
cttttagatcgggtaattgtccaaggtagtactctcactttaaatgctgtcggtttaggt
ttattaatttttggactgtttcgagttgcaattaatggattgcggcaatatttgctagac
catacggcgaaccgcattactttatcgatgattgtgggttttattaaacacaccttccga
ttacctttatcattttttgagtcgcgttacgttggcgatattatttcccgcctccaagaa
aatcataaaattcaacgttttttaacaggtgaatcactgtcaatctttctcgatttactg
actgtgttcatctatataggcttgatgttttggtacagttggaagatggcactattagta
ttggtaattttgccaccaatattattagttacctttttggcaacaccatttttacgccgg
atatcgcgagaaatatttaatgcgatcgcggctgaaagtagttacttaattgaagccctc
acaggtattagtactattcgttcaatgtcaattgaacagaccgtgaggtggaaatgggag
gaaaggttacatcaatcaattaaaaaaggcttttcgggacaaattattagtaatcaactg
caaattgctagcgccagtatcgaaactgtagcgactactagcttactgtggtttggggct
tggttggtaattcaaaatcaactgacaattgggcagttaattgccttcaatatgttgtta
ggtaatgtcattcgaccattccaaaggttagctgtgctgtggaatcaattacaagaagtg
atgatttctagcgagcggattaatgatgttttggaaacagaacccgaagaagatttacaa
gctgcaccaaagcaatttctccctagattgcgtggttatatccggttcgataatgtgaca
ttccgctaccacccagaaagtgagctaaatgtcctcgaaaatatcagttttgaggtaaaa
ccagagcaaactgtagctctggtagggcgtagtggttctggtaaaactactctttctaaa
ttaattttaggtctttatcctgccaccgaaggcaaagtcttaattgacaattacgattta
acgagtgtggctttaaagtcactgcgttctcaaattggtgttgtcgatcaagataccttt
ttatttggtggtacaattcgcgaaaatattagcattgctcatccagaatctacccaagaa
gaaatcatcgaagctgcaagtttagctggagccgatgaatttattcagcaattaccaatg
gggtatgaaacaccgattggggaaggtggtggactattatcgggtggacaaaggcaaagg
ttagcaattgcccgtgctttgttaggaaatccggctttattactattagatgaagccaca
agtcatcttgatgcggaatcagaacgcatcattcaaaataatctcaaaaccattacccaa
ggaaggacgacgctaattattgctcatcgtctttctaccatccgcaatgcagatttgatt
ttagttctagataaaggtgcattagtagaaagcggtaatcatgagcaattaattaaaagc
aaaggttattactattacctcaatcaacaacaattggcacaaactgtttga
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