Nostoc carneum: NIES2107_62170
Help
Entry
NIES2107_62170 CDS
T10358
Name
(GenBank) CRISPR-associated protein Cas6
KO
K19091
CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
ncw Nostoc carneum
Brite
Prokaryotic defense system [BR:
ncw02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
NIES2107_62170
Subtype I-D factors
NIES2107_62170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BAY34312
LinkDB
All DBs
Position
complement(7621503..7622645)
Genome browser
AA seq
380 aa
AA seq
DB search
MARAAISTTRKAKSKSVSTSSFPTWADDTELLGLVFDLEAISSTSLYSQYTIGLHAWFLD
QVRQFNPELSAYLHDGESEKPFNISALEGQLVPTGRQLHLEAKQTYHWHVNALSPRVAQF
LGQWLTQLPQTLALRDAPLQIKQVSIAHPPTTYAQLLQSSVEKQTNVSLSFVSPTSFRRK
GHHFPLPVPVNLFHSYLRRWNDFSGIPIETEAFLDWIDEGVIIHQHRLESVKVAAGKRGS
VTGFTGAISCGLSKAALANTEFTRLFYALVRLSPYCGTGHKTTFGLGQTRLDWLEPEPTT
PTQLLTNLLGERIAELTEIFTAQRKRTGGDRTDKIAATWATILARREMGESLQVIAEDLE
MPYTTVKTYVKLARRALKQD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagcagcaatatctaccactcgcaaagccaagtccaaatctgtatctacgtcc
tcttttcctacgtgggctgatgatacagaattgttgggattggtgtttgaccttgaagct
attagttcgacttccctatattcgcagtatacaattgggcttcatgcttggtttcttgac
caagtaagacaattcaacccggaactctcggcttatctccatgatggggaatcggaaaag
cctttcaatatctcagcattggaaggtcagctcgttcctactggtagacaactacatctg
gaagcaaagcagacttaccactggcacgttaatgccttatctccgagggtagcgcagttt
ttgggtcaatggttaacccaactgccacaaactttagctttaagagatgcacccttgcaa
atcaaacaggtgagtattgcccatccacccactacctacgcccaattgttgcagtcatct
gtggagaaacaaactaacgtcagtctcagctttgtttcccctaccagtttccgccgcaaa
ggtcatcatttcccgcttccagttcctgtaaatctcttccacagctatttgcgccgttgg
aatgacttttcgggaattcctatagaaacagaagctttcctcgattggatagatgaaggg
gtgattattcatcagcatcggttggaatcagtaaaagtggcggctggtaaacgcggttct
gtgactggctttacaggggcgatttcctgtggtttgagtaaagctgctttagctaataca
gaatttacccgcttgttttatgccttagtccgactttcgccttattgcggtacaggacac
aaaaccacctttggactcggacaaacgcgcttagattggttggaaccagaaccaactaca
cctacgcagttgctgacaaatttgctgggggaacggattgcagaattaacagagatattc
accgcccaaagaaaacgcacaggaggcgatcgcactgataaaattgctgcaacctgggcg
acaatcctggcaaggcgcgaaatgggagaatctttgcaagtgatagcggaagatttagaa
atgccctatactaccgtgaaaacttatgtcaaattggcgcgaagggcgttgaagcaagac
tag
DBGET
integrated database retrieval system
