Nonomuraea coxensis: Nocox_00605
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Entry
Nocox_00605 CDS
T07466
Symbol
fpg1
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase-like protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ncx
Nonomuraea coxensis
Pathway
ncx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nocox_00605 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncx03400
]
Nocox_00605 (fpg1)
Enzymes [BR:
ncx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Nocox_00605 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Nocox_00605 (fpg1)
DNA repair and recombination proteins [BR:
ncx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Nocox_00605 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Ribosomal_S13
Zn_ribbon_TFIIB
DUF294_C
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QYC37758
LinkDB
All DBs
Position
129719..130627
Genome browser
AA seq
302 aa
AA seq
DB search
MVRCAPYAGGMPELPEVESLAHFLRERAVGRSIMAVDVVGIQALKTFDPPVTALGGLTVT
GVARHGKFLDLDCDGLHLVIHLARAGWLRWRDDLSGARPVRPGKGPLAARVRFAPDDEGL
APGFELTEAGTQKRLAIYVTKNPDEVPGVAALGPDPLDPAFTVDALKRIVGGNRTQIKGL
LRDQKIIAGIGNAYSDEVLHAARMSPFKIAGTLTDAQVADLHEAIVTTLADAVERAHGLA
AKDLKAEKKSGLRVHNRAGQPCDVCGDTIREVSFADSSLQYCPTCQTGGKPLADRRMSKL
LK
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggtccggtgcgcaccgtacgctgggggcatgccggaacttcccgaagtggagtctctg
gcccacttcctgcgcgaaagggcggtgggccggtccatcatggccgtcgacgtggtcggc
atccaggcgctcaagacgttcgatccgccggtcacggcgctcggcgggctgaccgtgacc
ggggtggcgaggcacggcaagttcctcgacctcgactgcgacgggctgcacctggtcatc
catctggcgcgggccggatggctgcgctggcgcgacgacctgtcgggggccaggccggtg
cggccgggcaagggcccgctcgcggctcgggtgcgcttcgcgccggacgacgagggcctg
gcgccggggttcgagctgacggaggcggggacgcagaagcggctcgccatctatgtcacg
aaaaatccggacgaggtgcccggtgtcgccgcgctcggccccgaccccctcgacccggcc
ttcaccgtggacgcgctgaagcgcatcgtgggcggcaaccgtacgcagatcaagggcctg
ctccgcgaccagaagatcatcgcggggatcggcaacgcctactccgacgaggtgctgcac
gcggcgcggatgtccccgttcaagatcgctggaacgctgaccgacgcgcaggtcgccgac
ctgcacgaggccatcgtcaccacgctcgccgacgccgtcgagcgggcgcacggcctcgcg
gccaaggacctcaaggcggagaagaagtcgggccttcgcgtgcacaaccgggcggggcag
ccctgcgacgtgtgcggcgacacgatccgcgaggtgtcgttcgccgactcctcgctgcag
tactgccccacctgccagacgggcggcaagccgctggccgaccggcgcatgtccaagctg
ctcaaatga
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