Nonomuraea coxensis: Nocox_04385
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Entry
Nocox_04385 CDS
T07466
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ncx
Nonomuraea coxensis
Pathway
ncx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Nocox_04385 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncx03021
]
Nocox_04385 (rpoA)
03400 DNA repair and recombination proteins [BR:
ncx03400
]
Nocox_04385 (rpoA)
Enzymes [BR:
ncx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Nocox_04385 (rpoA)
Transcription machinery [BR:
ncx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Nocox_04385 (rpoA)
DNA repair and recombination proteins [BR:
ncx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Nocox_04385 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QYC38504
LinkDB
All DBs
Position
840620..841636
Genome browser
AA seq
338 aa
AA seq
DB search
MLIAQRPTLLEESLDDTRSRFVIEPLEPGFGYTIGNSLRRTLLSSIPGAAVTSIRIEGVL
HEFSTVPGVKEDVTDIILNLKELVVSSEHDEPVVMYLRKQGPGEVTAADIAPPAGVEVHN
PELRIATLNGKAKLEMELTVERGRGYVSAAQNKQPGQEIGRIPIDSIYSPVLKVTYKVEA
TRVEQRTDFDRLILDVETKPAMKPRDAVASAGKTLVELFGLARELNVEAEGIDIGPSPTD
AALAADLALPIEELNLTVRSYNCLKREGIHTVGELVARSEQDLLDIRNFGAKSIEEVKQK
LHEMSLSLKDSPPGFDPSAVAGGGYDDDDSAYVETEQY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgcccgactctcctggaagagtcgctcgacgacacccggtcccgg
ttcgtgatcgagccgctggagccgggcttcggttacaccatcggcaactcgctgcgtcgt
acgctgctgtcgtccatcccgggcgcggccgtgacgagcatccgcatcgagggcgtgctg
cacgagttctcgaccgttcccggggtcaaggaagacgtcaccgacatcatcctcaacctc
aaggaactggtcgtctcctcggagcacgacgagccggtcgtgatgtacctccgcaagcag
ggcccgggcgaggtcaccgccgccgacatcgcgcctccggccggtgtcgaggtgcacaac
cccgagctgcggatcgccacgctcaacggcaaggccaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgcccagaacaagcagccgggccaggagatcggt
cgcatcccgatcgactcgatctactccccggtgctcaaggtcacctacaaggtcgaggcc
acccgagtcgagcagcggaccgacttcgaccggctcatcctcgacgtcgagaccaagccc
gccatgaagccccgcgacgcggtggcctccgccggcaagaccctcgtcgagctcttcggc
ctggcccgtgagctcaacgtcgaggccgagggcatcgacatcggcccgtcgcccaccgac
gccgccctggcggccgacctggcgctgccgatcgaggagctcaacctcaccgtccgctcg
tacaactgcctcaagcgcgagggcatccacaccgtgggcgagctcgtcgcgcggagcgag
caggacctgctcgacataaggaacttcggcgccaagtcgatcgaagaggtcaagcagaag
ctgcacgagatgtcgctgtcgctcaaggactccccgcccgggttcgacccgagcgcggtg
gccggcggcggctacgacgacgacgacagcgcgtacgtcgagaccgagcagtactga
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