Nonomuraea coxensis: Nocox_04860
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Entry
Nocox_04860 CDS
T07466
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ncx
Nonomuraea coxensis
Pathway
ncx03420
Nucleotide excision repair
ncx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Nocox_04860 (uvrD1)
03430 Mismatch repair
Nocox_04860 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncx03400
]
Nocox_04860 (uvrD1)
Enzymes [BR:
ncx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nocox_04860 (uvrD1)
DNA repair and recombination proteins [BR:
ncx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nocox_04860 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
Nocox_04860 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
DUF3553
CarD_TRCF_RID
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
QYC38599
LinkDB
All DBs
Position
complement(944876..947119)
Genome browser
AA seq
747 aa
AA seq
DB search
MLDGLNPQQREAVIHHGSPLLIVAGAGSGKTRVLTHRIAYLLAERDVHPGEILAITFTNK
AAKEMKERIDKLIGPRSRAMWVMTFHSACMRILRREAKRLGFPSSFSIYDQADSQRLMAM
VCREMDLDPKRYPPRSFSAQVSNFKNELVDYESALDRAGSHLEKTLAQAYKSYQLKLTEA
GAMDFDDIIMNTVTLFQLFPDVAEHYRMRFRHVLVDEYQDTNHAQYILIRELVGHPELRT
ADGEQVRSGTSQSELCVVGDADQSIYAFRGATIRNILEFERDYPDARTILLEQNYRSTQN
ILAAANAVISRNESRKPKNLWSDQGDGPKIVGYVADNEHDEAMFVAQEVDRLSDEEGVRP
GDVAVFYRTNAASRVFEEIFIRTGLPYKVVGGVRFYERKEVKDLLAYLRVLANPGDVVSL
RRILNVPKRGIGERAEAMVEALAARERITYWEALRRADEAYGMATRSLNAVREFVAMLEE
LIAKAAGVPPSALAEEVLAATGYRAELEASEDPQDESRLENLNELISVASEFEEANPEGT
LVEFLEQVSLVADADQIPEADGGQGVVTLMTLHTAKGLEFPVVFLTAMEDGVFPHVRSLG
EPKELEEERRLAYVGITRARQRLYLTRAAVRSSWGAPAFNPASRFVNEVPGTLIDWRTDP
EKSAWSAATRREPAARPAPARGGAAGAGAGGRKVPSLTPGDRVTHDQFGLGTVVSVDGVA
EKTKVKVDFGSGGEKTLLLAYAPLEKL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacggcctcaacccgcagcagcgcgaggccgtgatccatcacggcagccccctg
ctcatcgtggcgggagcggggtcggggaagactcgggtgctcacccaccgcatcgcctac
ctgctggccgagcgtgacgtgcatccgggcgagatcctggcgatcacgttcaccaacaag
gccgccaaggagatgaaggagcgcatcgacaagctcatcgggccgcgctcgcgggcgatg
tgggtgatgacgttccacagcgcgtgcatgcgcatcctgcggcgggaggccaagcggctc
gggttcccgtccagtttctccatctacgaccaggccgactcgcagcggctcatggcgatg
gtctgccgcgagatggacctcgaccccaagcgctacccgccgcgctcgttctcggcccag
gtcagcaacttcaagaacgagctggtcgactacgagagcgcgctcgaccgggcgggctcg
cacctggagaagacgctcgcccaagcctacaagtcctaccagctcaagctcaccgaggcc
ggggcgatggacttcgacgacatcatcatgaacacggtgacgttgttccagctcttcccc
gacgtggccgagcactaccggatgcggttcaggcacgtcctggtggacgaataccaggac
accaaccacgctcaatacatcctgatcagggagctggtcggccatcccgagctgcgcacc
gccgacggcgagcaggtgcgctcggggaccagccagtccgagctgtgcgtggtcggcgac
gccgaccagtcgatctacgccttccgcggcgcgacgatccgcaacatcctggagttcgag
cgcgactaccccgacgcccgcaccatcctgctggagcagaactaccgctcgacccagaac
atcctggccgcggccaacgccgtcatctcccgcaacgagtcgcgcaagccgaagaacctc
tggtccgaccagggcgacggccccaagatcgtcggctacgtcgccgacaacgagcacgac
gaggccatgttcgtggcccaggaggtcgaccggctgagcgacgaggagggcgtcaggccg
ggcgacgtggccgtcttctaccgcaccaacgcggcctcccgcgtgttcgaggagatcttc
atccgcaccgggctgccctacaaggtcgtcgggggcgtgcgcttctacgagcgcaaggag
gtcaaggacctgctggcctacctgcgcgtgctggccaaccccggcgacgtggtgtccctg
cgccgcattctcaacgtgcccaagcggggcatcggcgagcgggccgaggcgatggtcgag
gcgctggcggcgcgcgagcggatcacctactgggaggcgctgcggcgggccgacgaggcc
tacggcatggccacgcgctcgctcaacgcggtgcgcgagttcgtcgccatgctggaggag
ctgatcgccaaggccgcgggcgtgccgccgtcggcgctggccgaggaggtgctggcggcc
accggctaccgcgccgagctggaggcgtccgaggacccgcaggacgagtcccgcctggaa
aacctcaacgagctgatctccgtggcctcggagttcgaggaggccaaccccgagggcacg
ctggtggagttcctggagcaggtctcgctggtggccgacgccgaccagatccccgaggcc
gacggcgggcagggggtcgtcacgctgatgaccctgcacaccgccaagggcctggagttc
cccgtggtgttcctgacggcgatggaggacggcgtgttcccgcacgtccggtcgctgggc
gagccgaaggagctggaggaggagcggcggctggcctacgtcggcatcacccgggcgcgg
cagcggctctacctgacgcgggcggccgtgcgcagctcgtggggggcgccggcgttcaat
ccggcctcgcgcttcgtcaacgaggtgccgggcacgctcatcgactggcgcaccgatccg
gagaagtcggcgtggagcgccgcgacccgcagggagcccgcggcgcggccggcgccggcc
cggggcggcgcggcgggcgcgggcgcgggcgggcgcaaggtgccgtcgctgacgcccggc
gaccgggtgacgcacgaccagttcggcctcggcacggtggtgtcggtcgacggcgtggcg
gagaagaccaaggtcaaggtcgacttcggcagcggcggggagaagacgttgctgctggcg
tacgcgccgctggagaagctgtag
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integrated database retrieval system
