Nonomuraea coxensis: Nocox_10355
Help
Entry
Nocox_10355 CDS
T07466
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ncx
Nonomuraea coxensis
Pathway
ncx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nocox_10355 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncx03019
]
Nocox_10355 (rny)
Messenger RNA biogenesis [BR:
ncx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Nocox_10355 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
HDOD
KH_2
Motif
Other DBs
NCBI-ProteinID:
QYC39691
LinkDB
All DBs
Position
2152553..2154172
Genome browser
AA seq
539 aa
AA seq
DB search
MGPLVVVLMVAVLVLAFGMVVALLVVVRRTSGASPKGVARPSPEQVQAVHEELEQAREEA
RDIRQKAEVDAEEMLRRSEAAAESAARMRQEVEAETRILKTELKELRADLERREARLAER
EQRLDEEARRQSERDRKLAETEVELADRREELLQVEDERRLILERVTGLTAEQAKAELVK
EIENQAKREAALIVREIESQARKEGEKRATKIVTLAVQRVAAEQTAESVVSVLHLPGDEM
KGRIIGREGRNIRAFESTTGVNLIIDDTPEAVLLSCFDPVRRETARLTLEKLVLDGRIHP
QRIEEAHERSRQEVQDLCARAGEDALVELGITDMHPELTLLLGQLRYRTSYGQNVLKHLI
ESAHIAGIMAAELKLDQRLVKRCALLHDIGKALTHEVEGSHALIGAEIARRYGEEEDVVH
AIEAHHNEVEVKTVEAVLTQAADAISGSRPGARRESLEAYVKRLERLEEIAQSYEGVEKV
FAMQAGREIRVMVKPDAIDDIQAQVIARDVAKQVEEELTYPGQIRITVVRESRATEFAR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggggccgctggtcgtggtgctgatggtggcggtgctcgtgctcgcgttcgggatggtc
gtcgcactgctcgtcgtcgtgcgccgcacgtccggcgcctcacccaaaggggtggccagg
ccgagtcctgagcaggtgcaggccgtgcacgaggagctcgaacaggcgcgtgaggaggcg
cgggacatccgccagaaggcggaggtcgacgccgaggagatgctgcgcaggtccgaggcg
gccgccgagagcgccgcgcggatgcggcaggaggtcgaggcggagacccgcatactcaag
accgagctcaaggaactgcgcgccgacctcgagcgccgcgaggcccgcctggccgagcgc
gagcagcggctggacgaggaggcccgccgccagtccgagcgtgacaggaagctggcggag
acggaggtcgagctggcggaccggcgcgaggagttgctccaggtggaggacgagcggcgg
ctcatcctggagcgggtgaccgggctgacggccgagcaggccaaggccgagctggtcaag
gagatcgagaaccaggccaagcgcgaggccgcgctcatcgtgagggagatcgagagccag
gcccgcaaggagggcgagaagcgcgccaccaagatcgtgacgctggccgttcagcgggtg
gcggccgagcagacggccgagtcggtggtcagcgtcctgcacctgcccggcgacgagatg
aagggccgcatcatcgggcgcgaggggcgcaacatccgggccttcgagtccacgaccggc
gtcaacctcatcatcgacgacacgcctgaggcagtgctgctgtcctgcttcgacccggta
cgccgggagaccgcacgcctcaccctggagaagctcgtcctcgacgggcgcatccacccg
cagcgcatcgaggaggcgcacgagcgcagccggcaggaggtccaggacctctgcgcgcgg
gccggcgaggacgccctcgtcgagctgggcatcacggacatgcaccccgagctgacgctc
ctgctgggccagctccgctaccgcacctcctatggccagaacgtgctgaagcacctcatc
gagtccgcgcacatcgccggcatcatggccgccgagctgaagctggaccagcggctggtc
aagcggtgcgccctgctgcacgacatcggcaaggccctcacgcacgaggtcgagggcagc
cacgcgctcatcggcgccgagatcgcccgccgctacggcgaggaggaggacgtggtgcac
gccatcgaggcgcaccacaacgaggtcgaggtgaagaccgtcgaagcggttctcacccag
gcggccgacgcgatcagcggcagccggccgggcgcgcggcgggagtcgctggaggcgtac
gtgaagcggctggagcggctggaggagatcgcgcagtcgtacgagggcgtggagaaggtg
ttcgccatgcaggccgggcgggagatccgggtcatggtcaagccggacgccatcgacgac
atccaggcccaggtgatcgcgcgggacgtggccaagcaggtggaggaggagctgacctat
cccgggcagatcaggatcacggtggtgcgggagtcgcgggcgaccgagttcgcccgctga
DBGET
integrated database retrieval system
