Nonomuraea coxensis: Nocox_15475
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Entry
Nocox_15475 CDS
T07466
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ncx
Nonomuraea coxensis
Pathway
ncx03030
DNA replication
ncx03430
Mismatch repair
ncx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nocox_15475 (dnaE1)
03430 Mismatch repair
Nocox_15475 (dnaE1)
03440 Homologous recombination
Nocox_15475 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncx03032
]
Nocox_15475 (dnaE1)
03400 DNA repair and recombination proteins [BR:
ncx03400
]
Nocox_15475 (dnaE1)
Enzymes [BR:
ncx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nocox_15475 (dnaE1)
DNA replication proteins [BR:
ncx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Nocox_15475 (dnaE1)
DNA repair and recombination proteins [BR:
ncx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Nocox_15475 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
OB_MCM10
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
QYC40710
UniProt:
A0ABX8TYZ1
LinkDB
All DBs
Position
3333104..3336631
Genome browser
AA seq
1175 aa
AA seq
DB search
MSSSDSFVHLHVHTEYSMLDGAARLKQMFKQVGDLGMPAIAITDHGNMHGAYDFYKQATG
AGIKPIIGIEAYVAPELRHNKRPVLWGEPHQKRDDVSAGGYYTHMTIWARDKTGLHNLMK
LSSRAYTEGFVRKWARMDAEILAEHAGGLMATTGCPSGEVQTRLRLGQYDEALKAAAKYQ
DIFGKDNFFLEIMDHGLDIERRVRDGLTRISKELGIPPLVTNDSHYTYESDAASHDALLC
IQTGKQLSDPDRFRFDGSGYYIKTADEMRAVDSSDLWAEGCRNTLLVAEKVDPEGFFTYK
NLMPTFPVPEGMTEEAFFRQEVWKGLERRFPEGVDDEHREWAENELRVIIQMGFPSYFLV
VADFIMWAKNNGIRVGPGRGSAAGSLVAYALGITDLDPIPHGLIFERFLNPERVSMPDVD
IDFDERRRGDVIRYVTEKWGADKVAMIATFGTIKAKAAIKDAGRVLGYPYALGDKVSKAF
PPAVMGKDIPLSGIFDKDHPRYAEAGELRKLYEEDVDVKSTIDLGRGLEGLIRQTGVHAA
GVIMSAEVLTDHIPIMRRDSDGAIITQFDYPTCETLGLLKMDFLGLRNLTIIDDCLKLIE
ATSGEQIDLLKLPLDDRKSYELLSRGDTLGIFQLDGGGMRTLLRLMKPDNFEDISAALAL
YRPGPMGANSHTNYALRKNGAQEITPIHPELEEPLAEILSTTYGLIVYQEQVMAIAQKVA
NYSLGGADLLRRAMGKKKKSELDKQFVTFEAGMKDNGFSDAAVKALWDILLPFSDYAFNK
AHTAGYGLVSYWTAYLKANHPAAYMAALLSSVKDDKDKSALYLNECRRMGIKVFPPDVND
SDFDFTPRGTDIRFGLSAVRNVGANVVDGIIAARKEKGRFADFKDFLRKVPALVCNKRVI
ESLVKAGAFDSLGHVRKGLVMVHEQAVDAIIDIKKNEAIGQDSLFGAIDGGEDQTFDVQI
PPGEWDKTTLLQFEREMLGLYVSDHPLFGVEHILAAGADCSIAALQDDSRPDGQIVTVGG
ILSGVQRKVTKKGDTWVLTQLEDLEGAIEVMIFPSAYQLCSTILAEDAIVFVKGRIDKRE
DIGKIIAMEVTAPDLTQEAGGPLLVSLPLTRCTPPVVGRLKEILTTHPGTSEVHLQVHNG
PRTTVMRVDDRLRVTPSPALMGDLKQLLGPACLGA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccagcgactcgttcgtccatctgcacgtgcacaccgaatactcgatgctggac
ggcgccgcccggctgaagcagatgttcaaacaggtcggcgacctcggcatgccggcgatc
gccatcaccgaccacggcaacatgcacggcgcctacgacttctacaagcaggcgaccggc
gccggcatcaagccgatcatcggcatcgaggcgtacgtcgcgccggagctgcgccacaac
aagcgcccggtgctgtggggcgagccgcaccagaagagggacgacgtctcggcgggcggc
tactacacccacatgacgatctgggcccgtgacaagacgggcctgcacaacctgatgaag
ctcagctcgcgcgcctacaccgaggggttcgtgcgcaagtgggcccgcatggacgccgag
atcctcgccgagcacgccgggggcctcatggccacgaccggctgcccctcgggcgaggtg
cagacccggctgcgcctcggccagtacgacgaggcgctcaaggccgccgcgaaataccag
gacatcttcggcaaggacaacttcttcctggagatcatggaccacggcctcgacatcgag
cgccgcgtccgcgacgggctgacccgcatcagcaaggagctgggcatcccgcccctggtc
accaacgactcccactacacctacgagtccgacgccgcctcgcacgacgccctcctgtgc
atccagacgggcaagcagctctccgaccccgaccgcttccgcttcgacggctccggctac
tacatcaagaccgccgacgagatgcgcgccgtcgactcctccgacctgtgggccgagggc
tgccgcaacaccctgctcgtggcggagaaggtcgatcccgaggggttcttcacctacaag
aacctcatgccgaccttccccgtccccgaggggatgaccgaggaggcgttcttccggcag
gaggtctggaagggcctggagcgccgcttccccgagggcgtcgacgacgagcaccgcgag
tgggccgagaacgagctgcgggtcatcatccagatgggcttccccagctacttcctcgtg
gtcgccgacttcatcatgtgggccaagaacaacggcatccgcgtcggtcccgggcgtggt
tcggcggccgggtcgctggtggcgtacgcgctgggcatcaccgacctcgacccgatcccg
cacggcctgatcttcgagcgcttcctcaaccccgagcgcgtgtccatgcccgacgtcgac
atcgacttcgacgagcgccggcgcggcgacgtcatccgctacgtgaccgagaagtggggc
gccgacaaggtcgccatgatcgccacgttcggcaccatcaaggccaaggccgccatcaag
gacgccggccgcgtcctcggctacccctacgcgctgggcgacaaggtctccaaggcgttc
ccgcccgccgtcatgggcaaggacatcccgctgtcgggcatcttcgacaaggaccacccc
cgttacgccgaggccggcgagctgcgcaagctctacgaggaggacgtcgacgtcaagtcg
acgatcgacctcgggcgcggactggagggcctgatccggcagaccggcgtgcacgccgcc
ggcgtgatcatgtccgccgaggtgctgaccgaccacatcccgatcatgcgccgcgactcc
gacggcgcgatcatcacgcagttcgactatccgacctgcgagacgctcggcctgctgaag
atggacttcctgggcctgcgcaacctcacgatcatcgacgactgcctcaagctgatcgag
gccaccagcggcgagcagatcgacctgctcaagctgccgctggacgaccgcaagtcctac
gagctgctgtccagaggcgacacgctcggcatcttccagctcgacggcggcggcatgcgc
accctgctgcgcctgatgaagcccgacaacttcgaggacatctccgccgccctcgcgctc
taccggcccggccccatgggcgccaactcccacaccaactacgcgctgcgcaagaacggc
gcgcaggagatcaccccgatccatcccgagctggaggagccgctcgcggagatcctgtcc
acgacctacggcctgatcgtctatcaggagcaggtcatggccatcgcccagaaggtcgcc
aactactcgctgggcggcgccgacctgctgcggcgcgcgatgggcaagaagaagaagtcc
gagctggacaaacagttcgtgaccttcgaggcgggcatgaaggacaacggcttctccgac
gccgcggtcaaggccctgtgggacatcctgctgcccttctccgactacgccttcaacaag
gcccacactgccggttacggcctggtctcctactggaccgcctatctcaaggccaaccac
ccggccgcctacatggccgcgctgctgtcgtcggtcaaggacgacaaggacaagtcggcg
ctctacctcaacgagtgccgccgcatgggcatcaaggtgttcccgccggacgtcaacgac
tccgacttcgacttcacgccgcgcggcaccgacatccgcttcggcctgtcggccgtccgc
aacgtcggcgccaacgtcgtcgacggcatcatcgccgcgcgcaaggagaagggccgcttc
gccgacttcaaggacttcctgcgcaaggtgcccgcgctggtgtgcaacaagcgcgtcatc
gagtcgctggtcaaggcgggcgcgttcgactcgctcgggcacgtccgcaagggcctggtc
atggtgcacgagcaggccgtcgacgcgatcatcgacatcaagaagaacgaggccatcggc
caggactccctgttcggcgcgatcgacggcggcgaggaccagacgttcgacgtgcagatc
ccgccgggcgagtgggacaagaccacgctgctgcagttcgagcgggagatgctcggcctc
tacgtctccgaccatccgctgttcggcgtcgagcacatcctggcggccggggccgactgc
tcgatcgcggccctccaggacgacagccggcccgacgggcagatcgtgacggtgggcggc
atcctgagcggggtgcagcgcaaggtcaccaagaagggcgacacctgggtgctgacccag
ctggaggacctcgaaggcgcgatcgaggtgatgatcttcccgtcggcctaccagctctgc
tcgacgatcctggccgaggacgcgatcgtgttcgtcaagggacgcatcgacaagcgcgag
gacatcggcaagatcatcgcgatggaggtgactgcgcccgacctcacccaggaggccggc
gggccgctgctggtcagcctgccgctgacccgctgcacgccgcccgtggtgggccggctg
aaggagatcctcaccacgcacccgggcacgtcggaggtgcacctgcaggtccacaacggg
ccgcggacgacggtgatgcgggtcgacgaccggctgcgcgtcacaccgtcgccggccctg
atgggcgacctcaaacagctcctcggcccggcctgcctcggcgcctga
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integrated database retrieval system
