Nonomuraea coxensis: Nocox_15840
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Entry
Nocox_15840 CDS
T07466
Symbol
pipB3
Name
(GenBank) Secreted effector protein PipB
Organism
ncx
Nonomuraea coxensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
TIR_2
Pentapeptide
NBCH_WD40
Ge1_WD40
NACHT
WDR54
Pentapeptide_4
Pentapeptide_3
RMC1_N
PROPPIN
TIR
nSTAND1
AAA_22
AAA_16
AAA
Motif
Other DBs
NCBI-ProteinID:
QYC40782
LinkDB
All DBs
Position
complement(3410648..3416227)
Genome browser
AA seq
1859 aa
AA seq
DB search
MARDGRPTDIFVSYSPADTAWATWIAWELEAAGYRTMIQAWDFVPGTNFIDFMDRGVSEA
QLVVAVLSRNYLTSRYGRMEWQAALRADPDNPSNKLVTIRLEDVHLEGLLSTITWVDLLG
VTDPGQARALLLGRVGEALAGRAKPEYAPAFPDAGRGGRAPAPAPTLPPPAERARTRRAP
VTAPAFPPAAGPVGGRKSVSVLHIGGPRFGRALPDPGDPFTPEDMQARIWADLTAMYDRG
TPRPDLMVVSGDLTESGSLRQFGQATRFVTDLRLLLGLEPHRLVLLPGPRDVTKAAASAY
FMTCEADDVSPQPPYWPKWRHFAGLFGEVYQGLDDRVFDGGQPWTLFEVPDLKVVVAALN
STMAMSHLERDAYALLGEAQAAWFAERLRPYEEGGWLRLGAMGHPPGELRDAPTYERLLG
HRLHLLFHGGPGHGGEGRVAAPRAGRHQVVEITPDGMRTWLPDEGVPERVPGRWRGAQAT
FTGRTLDVPPPRPKPDERAPSPVELLLDRIAEVCEARHERARIRRFPAHLVVTHPDDGFV
RQTMIGAHVGEVTEEAADAFARQAHAAGLAAELVHQGPPAPRWIRDDLMRQGVRLRSFTE
FQGLLDLTGYVSEQTARLVGDRRYPPELYVPQRFRELDRPGGQVRQGLTDEMMRLLATDH
GRFLLLLGDFGHGKTFALRELARRIPAELPHLTPILIELRALDKAHSVDALVAAHLASHG
EEYIDLKAFRYLLRQGRIVLLFDGFDELVTRLTYDRAADHLATLLAAAEDKAKVVVASRT
QHFKSHSQVLTSLGEMVGVLPQRRVLSVEDFTHDQIRSYLANRFEGGDEAHARMSLMGEL
TDLLALAQNPRMLSFIADLDADRLRTVARARHTISPALLYEEILGSWLAFEERRARVPGS
ALALTIGELWQVVTALALRLWETGESLLGVDELTEIGETLTDLAGGQLSAAHAAHAMGSG
SLLVRTEEGMFGFIHASVMEWLIARHLAMDNLALLSRRPLSALTVEFLCDLADVRALRAW
VADPPADDVSRANAVKIAARLRTPARADLRGANLKGEDLSARDLREVDLTGADLSEATLA
GTNLSRAVLRGARLAGARLDGATLAGADLTDADLSGARLAQTDLSDVTVTGARWHRAALI
NVTGTLPRLPGAAVVPGQPIEVEFAPAGIGVPYGYHFQTSRLPEPIAYSPDGATVAIGDE
DGGVLLCAGGAPVRTLQGHRGRVYAVSFAGDLLATGASDGQVILWDALTGERLRTLDGHA
DGVWPVRLSPGGDLVAAGGGDGVVRVWESATGRTAHELAGHQAPVYTMAFGRSALVTGDA
AGAVRVWDLESGQVLHTLDGHRGSVYRSVLSPGGALLATGDEAGTVRLWDAASWELLHTL
TGHAGSVYSMAFSADGSLLASGDTAGGVRLWEPSGRALGVHTTHASAVYQVAFSPDGAVL
ASGDSAGLVRLQPVGGGPRVELTGHRSSVWPFAYRPDGHQLATSSNDGTVRLWDPHTGQC
QRVLRGHGRRISSVRFSADGTMLATSGNDGVVRLWEPRTGRRLREFSGTSDRLISALFSP
AGPVLATSSNDGGVHLWNAVTGDYERELHAETDHVWAEAFSPDGDLLATANDDDSVRIWY
RPTGRLTANLLDHRGRVRSIAFSPDGSYVATGCDDKLVRIWHVASGGRIATLEGHTDRVY
SVAFSPDGRLLASAGNDGRALVWELLPGQPWQPRLAHTLGGGDGGRWWSVAFDAAGVRLA
TGGDDKLVRIWDAATGRQLHALAGHSRRVWSVAFSPAGDDLLASAGDDGVVILWAGGERR
ATLLGLPEGWAALAPDGRYKLHGEPGGQFWHVVGMSRFELGELDPYLPGVRQVPLDSPF
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtgacggcaggccgaccgacatcttcgtcagctactccccggccgacaccgcg
tgggcgacgtggatcgcctgggaactcgaggcggccggctaccggacgatgatccaggcg
tgggacttcgtccccggcaccaacttcatcgacttcatggaccggggggtgagcgaggcc
cagctcgtcgtcgccgtgctctcgcgcaactacctgacctcccgctacggccggatggag
tggcaggcggcgctgcgggccgaccccgacaacccctccaacaagctcgtcaccatccgc
ctggaggacgtccacctcgaagggctgctgtccacgatcacctgggtcgacctgctcggc
gtcaccgacccggggcaggccagggcgctgctgctgggccgggtcggcgaggcgctggcg
ggccgggccaagccggagtacgcgcccgccttccccgacgccggcaggggcggccgcgcg
ccggcgcccgcgccgacgctgccgcccccggccgagcgggcgcgcacgcgccgcgccccg
gtgaccgcgcccgccttcccgcccgcggccggccccgtcggcgggcgcaagtcggtcagc
gtgctgcacatcggcggcccccggttcggccgggcgctgcccgaccccggcgacccgttc
acgcccgaggacatgcaggcgcgcatctgggcggacctcaccgcgatgtacgaccgcggc
accccccgtcccgacctcatggtcgtcagcggcgacctgaccgagtcgggcagcctgcgg
cagttcgggcaggccacccggttcgtcaccgacctgcggctgctgctcgggctggagccg
caccggctggtgctgctgccggggccgcgcgacgtgaccaaggcggcggccagcgcctac
ttcatgacgtgcgaggccgacgacgtgagcccgcagcctccttactggccgaagtggcgg
cacttcgccgggctgttcggcgaggtctaccaggggctggacgaccgggtgttcgacggc
gggcagccgtggacgctgttcgaggtgcccgacctcaaggtggtggtggcggcgctcaac
tcgacgatggcgatgagccacctcgaacgggacgcgtacgcgctgctgggcgaggcgcag
gcggcctggttcgccgagcggctgcggccgtacgaggagggcggctggctgcgcctcggc
gcgatgggccatcctccgggggagctgcgggacgcgccgacgtacgagcggctgctgggt
caccgcctccacctgctcttccacggcggccccgggcacggcggcgagggccgggtggcc
gcgccgcgcgccgggcggcaccaggtcgtcgagatcacccctgacggcatgcgcacctgg
ctgccggacgagggggtgcccgagcgggtgcccggcaggtggcggggcgcgcaggcgacg
ttcaccggccgcaccctcgacgtgccgccgccgcggcccaagccggacgagcgcgcgccg
agccccgtcgagctgctgctcgaccggatcgccgaggtgtgcgaggcgcggcacgagcgg
gccaggatccgccgcttccccgcccatctcgtggtcacccaccccgacgacgggttcgtc
cggcagacgatgatcggagcgcacgtcggcgaggtgaccgaggaggccgccgacgcgttc
gcccggcaggcgcacgccgccgggctggccgccgagctggtccaccagggcccgccggcg
ccccgctggatccgcgacgacctgatgcggcagggggtgcggctgcgcagcttcaccgag
ttccagggcctgctcgacctcaccggctacgtcagcgagcagaccgcccggctggtcggc
gaccgccgctacccgcccgagctgtacgtcccgcagcgcttccgcgagctcgaccgcccc
ggcggccaggtcaggcagggcctgacggacgagatgatgcggctgctggccaccgaccac
ggccgcttcctgctgctgctcggcgacttcgggcacggcaagacgttcgcgctgcgcgag
ctggcccggcgcatcccggccgagctgccgcacctgacgccgatcctcatcgagctgcgc
gccctggacaaggcgcactcggtggacgccctggtggcggcccacctggcctcccacggc
gaggagtacatcgatctcaaggcgttccgctacctgctgcgccagggacgcatcgtgctg
ctgttcgacgggttcgacgagctggtgacgcggctgacctacgaccgggcggccgaccac
ctggcgacgctgctggcggcggccgaggacaaggcgaaggtcgtggtggccagccgcacc
cagcacttcaagtcgcacagccaggtgctcacctcgctcggcgagatggtcggcgtgctg
ccgcagcggcgggtgctcagcgtcgaggacttcacccacgaccagatccgctcctacctc
gccaaccggttcgagggcggcgacgaggcgcacgcccgcatgtcgctcatgggcgagctg
acggacctgctggcgctcgcgcagaacccgcgcatgctctccttcatcgccgacctcgac
gccgaccggctgcgcaccgtcgcgcgggcccgccacacgatcagcccggccctgctgtac
gaggagatcctcggctcgtggctggccttcgaggagcggcgggcccgggtgcccggctcg
gcgctggcactgaccatcggcgagctgtggcaggtggtgacggcgctcgcgctgcggctg
tgggagacgggcgagtcgctgctcggcgtggacgagctgaccgagatcggcgagaccctc
accgacctggcgggcggccagctctcggccgcgcacgcggcgcacgcgatgggctcgggc
agcctgctcgtccgcaccgaggagggcatgttcggcttcatccacgcctccgtcatggag
tggctgatcgcccggcacctcgccatggacaacctcgccctgctctcccgccgcccgctg
tcggcgctcaccgtggagttcctgtgcgacctcgcggacgtgcgggcgctgcgcgcctgg
gtggccgatccgcccgccgacgacgtctcccgcgccaacgccgtcaagatcgccgcccgg
ctgcgcaccccggcccgcgccgacctgcgcggcgccaacctcaagggcgaggacctgtcg
gcgcgcgacctgcgcgaggtcgacctcaccggcgccgacctgtcggaggccacgctggcg
ggcaccaacctgtcgcgggccgtcctgcgcggggcccggctggcgggcgcgcggctcgac
ggcgcgacactcgccggggccgacctcaccgacgccgacctgtcgggggcgcggctcgcg
cagaccgacctcagcgacgtgaccgtgacgggcgcccgctggcaccgggccgcgctgatc
aacgtcaccggcacgctgccgcgcctgcccggcgcggccgtggtgccggggcagccgatc
gaggtggagttcgcccccgccggcatcggcgtcccgtacggctaccacttccagaccagc
cgcctgcccgagccgatcgcctacagccccgacggcgccacggtcgcgatcggcgacgag
gacggcggcgtgctgctgtgcgcgggcggcgcgccggtacgcacgctccagggccaccgg
ggccgcgtctacgccgtctccttcgccggcgacctgctggccacgggggcgagcgacggc
caggtcatcctgtgggacgcgctcaccggcgaacggctccgcacgctcgacggccacgcc
gacggcgtctggccggtgcgcctcagccccggcggcgacctggtcgcggccgggggcggc
gacggcgtcgtgcgcgtgtgggagagcgcgaccggacgcacggcgcacgagctggccggg
caccaggcgccggtctacacgatggccttcggccgctcggcgctggtgaccggcgacgcg
gcgggggccgtgcgggtctgggatctggagagcgggcaggtgctgcacaccctcgacggc
caccgcggcagcgtctaccgctcggtgctcagccccggcggcgcgctgctggccaccggc
gacgaggcgggcacggtccggctctgggacgccgcctcctgggagctgctgcacaccctc
accgggcacgcgggcagcgtctactccatggccttctcggcggacggctcgctgctggcc
agcggcgacaccgcgggcggcgtacggctctgggagccgtcggggcgggcgctcggcgtg
cacacgacgcacgcgtcggcggtctaccaggtcgccttcagccccgacggcgccgtgctc
gcctccggcgactccgccgggctcgtacgcctccagccggtgggcggcgggccgcgggtg
gagctgaccgggcaccgcagctcggtgtggccgttcgcgtaccggcccgacgggcatcag
ctcgcgaccagcagcaacgacggcaccgtgcggctgtgggacccccacaccggccagtgc
cagcgggtgctgcgcggccacgggcggcgcatctcgtcggtgcgcttcagcgccgacggc
acgatgctggccaccagcggcaacgacggcgtcgtccgcctgtgggagccgcgcaccggg
cggcggctgcgcgagttcagcggcacctccgaccggctgatctccgcgctgttctccccc
gccgggccggtgctggccacctccagcaacgacggcggcgtgcacctgtggaacgccgtc
accggcgactacgagcgcgagctgcacgccgagaccgaccacgtgtgggccgaggcgttc
agtcccgacggcgacctgctggccacggccaacgacgacgacagcgtgcgcatctggtac
cggccgaccgggcggctgacggccaacctgctcgaccaccgggggcgggtgcgctcgatc
gcgttcagccccgacggctcgtacgtggccaccggctgcgacgacaagctggtccggatc
tggcacgtggcctcgggcggccggatcgccaccctggaagggcacaccgaccgggtctac
tccgtggccttctcccccgacgggcggctgctggccagcgccgggaacgacgggcgcgcc
ctggtgtgggagctgctgcccggccagccctggcagccgcggctcgcccacacgctcggc
ggcggcgacggcgggcggtggtggagcgtcgccttcgacgccgcaggcgtgcgcctcgcg
accggcggcgacgacaagctcgtccggatctgggacgccgcgaccgggcggcagctccac
gcgctggccgggcactcccggcgggtctggtcggtcgccttcagcccggccggcgacgac
ctgctggccagcgcgggcgacgacggcgtggtgatcctgtgggcgggcggcgagcggcgg
gcgacgctgctcgggctgcccgaggggtgggcggcgctggcccccgacggccggtacaaa
ctgcacggcgagccgggcgggcagttctggcacgtggtcgggatgtcgcggttcgagctg
ggcgagctggatccgtacctgccaggggtgcggcaggtgccgctggactcacccttctga
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