Nonomuraea coxensis: Nocox_16010
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Entry
Nocox_16010 CDS
T07466
Symbol
rluB
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ncx
Nonomuraea coxensis
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncx03009
]
Nocox_16010 (rluB)
Enzymes [BR:
ncx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Nocox_16010 (rluB)
Ribosome biogenesis [BR:
ncx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Nocox_16010 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QYC40816
LinkDB
All DBs
Position
3448164..3450107
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AA seq
647 aa
AA seq
DB search
MINRRSTPSGDGRGRGRTGGSDRSAGRGGRPAFRTERDDRGYGGRTSGDRDRSYGDRDRG
RSAGDRSYGGDRDNRGYGRDSGGDGRPSRDSLRADRGGSRARYGGRDGASEGRYPRDDRN
RRDDRYAGDRGGDRDRGSWPRGDRDDRPARADRDGGYSRDDRSDRSDRPDRYGRSARAER
PRGEGFGGPRGDRDRDRSGDRSYGGDRSGERGGNRGWDRDRDGNRGGYRADRPERRTDRS
TDRPERRTDRFGDRPERRTDRFGDRPERRTDRFGDRSEGRGERFGERSEGRGYRSDDRGG
YRSERGGGRSEQGAPREAGSTRSRYGRRDGDAPRGVVRANARGGRRDDVQTIGRAGRTGG
PGGGASGDRKGPGSPQQARIKAGRQPIRDRDLFPEGYTDERDTTEVPDGVRLQKVLAQAG
VASRRACEEMIGEGRVTVNGQVVRRFGAKVDPAKQVIHVDGKRIPTAPDLVYYALNKPIG
VVSTMEDPQGRPCLADFVQELAPRLFHVGRLDTETEGLLLLTNDGELANRLTHPSYGVQK
KYWAKVPGPIPRDLGRRLKQGIELEDGLARADSFAIVQEHAQQALVEVVLHEGRKHVVRR
MLEEAGHRVIDLARIEFGPVKLGRTKPGTIRALTLKEVGELYAAVKL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaacaggcgaagcaccccgtccggtgatggacgcggtcgtggacgcaccggcggc
tcggaccgaagtgccggccgtggcgggcgtcccgccttccgcacggagcgcgacgaccgc
gggtacggcggccggacgtccggcgaccgcgaccggtcctacggcgaccgtgaccgcggc
cggtcggccggcgaccgctcgtacggcggtgaccgtgacaaccgtggctacggccgcgac
tccggcggcgacggccggccttcgcgcgactccctccgcgccgaccgcgggggctcccgc
gcccggtacggcggacgtgacggcgcgagcgagggccgctacccccgagatgaccgaaac
cgccgcgatgaccgttacgccggcgaccgcggcggcgaccgtgaccgcggctcctggccg
cgcggcgaccgcgacgaccggcccgcccgtgccgaccgggacggcgggtactcccgggac
gaccgctccgaccgctccgaccggcctgacaggtacggtcgcagcgcccgcgccgagcgc
ccgcgcggcgaaggcttcggcggcccccggggcgaccgtgaccgcgaccgatccggcgac
cgctcgtacggtggtgaccggtcaggtgagcggggcggcaaccggggctgggaccgcgac
cgcgacggtaaccgcggcggctaccgagccgaccgccccgagcgccgcaccgaccggtcc
accgaccgccccgagcggcggacggatcgtttcggtgaccgtcctgagcggcgtacggat
cggttcggtgaccgtcctgagcggcgtaccgaccggttcggtgaccgttctgaggggcgt
ggcgagcggttcggtgagcgttccgaggggcgtggctaccggtcggatgaccggggcggc
taccggtccgagcggggcgggggccgttccgagcagggcgcgccccgcgaggcggggtcg
acccgttcccgctacggcaggcgtgacggcgacgcgccccgcggcgtcgtacgggcgaac
gcccgtggcggcaggcgcgacgacgtccagacgatcggcagggccggcaggaccggcggg
ccgggaggcggcgcgtccggtgaccgcaagggtcccggcagcccccagcaggcccggatc
aaggcgggccgccagcccatccgcgaccgcgacctgttccccgagggctacaccgacgag
cgtgacaccaccgaggtcccggacggcgtccggctgcagaaggtgctcgcgcaggcgggc
gtggccagccgcagggcgtgcgaggagatgatcggcgagggccgcgtcacggtgaacggc
caggtcgtacggcgcttcggcgccaaggtcgacccggccaagcaggtcatccatgtggac
ggcaagcgcatcccgacggcccccgacctggtctactacgcgctgaacaagcccatcggc
gtcgtgtccaccatggaggacccgcagggccgcccgtgcctggccgacttcgtccaggag
ctggcgccgaggctgttccacgtgggccggctcgacaccgagaccgagggcctgctgctg
ctcaccaacgacggcgagctggccaaccggctcacccacccgagttacggcgtgcagaag
aagtactgggcgaaggtgcccggcccgatcccgagggacctcgggcggcggctcaagcag
ggcatcgagctggaggacggcctcgccagggccgacagcttcgccatcgtgcaggagcac
gcccagcaggcgctggtcgaggtcgtcctgcacgaggggcgcaagcacgtcgtcaggcgg
atgctggaggaggcggggcaccgggtcatcgacctggccaggatcgagttcggcccggtg
aagctgggccgcaccaagcccggcacgatccgcgcgctgaccctgaaagaggtcggcgag
ctgtacgcggccgtgaagctgtaa
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