Nonomuraea coxensis: Nocox_25950
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Entry
Nocox_25950 CDS
T07466
Symbol
pelA
Name
(GenBank) Pectate trisaccharide-lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ncx
Nonomuraea coxensis
Pathway
ncx00040
Pentose and glucuronate interconversions
ncx01100
Metabolic pathways
ncx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Nocox_25950 (pelA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Nocox_25950 (pelA)
Enzymes [BR:
ncx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Nocox_25950 (pelA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RicinB_lectin_2
Pectate_lyase_4
Ricin_B_lectin
Beta_helix
CDtoxinA
NosD
Motif
Other DBs
NCBI-ProteinID:
QYC42791
LinkDB
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Position
complement(5551626..5553071)
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AA seq
481 aa
AA seq
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MRHESIGRTGAVLAGVVTLTASAVTGVVMASAAEAAPAPGAYTIVNNASGLCLTVPGAGT
SDGVQLTQAGCGGSGQVWNLAAAGSGYTVKAAHSGKCAGVEGASTSAGKAVQQESCTGAS
SQTWTVTESGGTVRIANANGGKCLNTKDNSTSSGALVQVNSCDSVATKQWRLAPASGGTT
GPTPTTTPTTPPPGGGTPNGLVGWATQGGGTTGGGGTSPTTVTSSSALSSALSASGAAVI
RVSGTISCSGMLKVGSNKTILGNSGAVISGCGLNISQASNVIVRNLTFRNWNDDAINVQY
STRVWIDHNSFSNGYDGAVDVKRASDYVTISWNRVSSHDKTMLLGHDDGNGSEDRGHLRV
TYHHNWFDGTNQRHPRVRFGNPVHVYNNFYGNIGSYGVASTQEAGVLVEGNYFENTDDPY
HRGEGDSGPGSLVARNNCFVNSGSGEAGGSVASIPYSYTLDTPCNVKSIVTGGAGAGRIS
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgcgacacgaatccatcggcaggacgggcgcggtcctcgcgggcgtcgtcaccctcacc
gcctccgcggtgaccggcgtcgtcatggcctcggcggcggaggccgctcccgcgcccggg
gcgtacacgatcgtgaacaacgcgagcggcctgtgcctcaccgtgccgggcgccggaacg
tccgacggcgtccagctcacccaggccggctgcggcggctccggccaggtctggaacctg
gccgccgccggctccggctacacggtcaaggccgcccacagcggcaagtgcgcgggcgtg
gagggcgcgagcacctccgcgggcaaggccgtgcagcaggagagctgcaccggcgcctcg
tcccagacctggacggtgaccgagtccggcggcaccgtcaggatcgccaacgccaacggc
ggcaagtgcctcaacaccaaggacaactccacctcctccggcgccctggtgcaggtcaac
tcctgcgactcggtcgccaccaagcagtggaggctggcgcccgcgagcggcggcaccacc
ggcccgaccccgacgaccacgcccaccacgccgccgcccggcggcggaaccccgaacggc
ctggtcggctgggccacgcagggcggcggcaccacgggcggcggcggcaccagcccgacc
accgtcacctcctcctcggccctgtccagcgccctgtccgcgagcggcgcggcggtgatc
cgggtctccggcacgatctcctgctcaggcatgctgaaggtcggctccaacaagacgatc
ctcggcaactccggcgccgtcatctccggctgcgggctcaacatctcccaggcgtccaac
gtcatcgtccgcaacctcaccttcaggaactggaacgacgacgccatcaacgtccagtac
tcgacccgggtgtggatcgaccacaacagcttcagcaacggctacgacggcgcggtcgac
gtcaagcgggccagcgactacgtcaccatctcctggaacagggtcagctcccacgacaag
acgatgctgctcggccacgacgacggcaacggctcggaggaccgcggccacctgcgggtg
acctaccaccacaactggttcgacggcaccaaccagcgccacccgcgggtgcgcttcggc
aacccggtgcacgtctacaacaacttctacggcaacatcggcagctacggcgtagcctcc
acccaggaggcgggcgtgctggtcgagggcaactacttcgagaacaccgacgacccgtac
caccggggcgagggcgactccggcccgggcagcctggtcgcgcgcaacaactgcttcgtc
aactccggcagcggcgaggcgggcggcagcgtcgcctccatcccctactcctacacgctg
gacaccccctgcaacgtcaagtccatcgtgaccgggggcgcgggcgccgggcggatctcc
gtctga
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