Nonomuraea coxensis: Nocox_31970
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Entry
Nocox_31970 CDS
T07466
Symbol
spoVD
Name
(GenBank) Stage V sporulation protein D
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ncx
Nonomuraea coxensis
Pathway
ncx00550
Peptidoglycan biosynthesis
ncx01100
Metabolic pathways
ncx01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Nocox_31970 (spoVD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Nocox_31970 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ncx01011
]
Nocox_31970 (spoVD)
Enzymes [BR:
ncx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Nocox_31970 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ncx01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Nocox_31970 (spoVD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QYC43970
LinkDB
All DBs
Position
complement(6839180..6841225)
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AA seq
681 aa
AA seq
DB search
MIRMRTRLLVLHVLVLALLVVLIGRLYQVQVVHGQEFVTRATETRTRTVIVPAVRGQILD
SSGRPLVRNRTALVVSVDRALLSRTPDGGLKVLTKLSQVLGRPVQELQRKITPCGPKVPK
PCWTGSPYQPVPLDEKVDTREALQILERQEEFPGVTAEIHSVRQYPGGRAGAQMLGYLQP
VTEEELEKREGLKAAFSGVDLAGRDGLEYVYDDALRGKAGLRRVQVDRMGKALGVEDQVT
PIPGDHLVTSIDSRIQTVTEKALAKAMKSAPQADGGAAVVLDARSGRVVALASQPNYDPE
IWGGGISARGYQWLMSEKSGKPLVSRAINGQFAPGSTFKISSVTSMLRAGYPLNGTYDCA
GSYNVGGRAFNNFRGIGLGPMNLHTALVKSCDTIFYRAAYEQYLKDGGRYPKKTPKEVFA
NTARAFGFGRPTGVDLPGESGGRIPDRAWKKNLWNQTSAINCERSRKGYPEVKDRARAEF
LKRLALENCTEGFLLRPGDSANFSIGQGDVLVTPMQLARAYMALVSDGKLRSPRIGWAQV
RPDGKVVRTIPVPVVGKLPLSEKERRYIKNALSQVAQDGTAAGAFAGFPMDKVRVGGKTG
TAEVWGKQDTSWFASFAPTKNPQYVVVVMVSQGGMGAQTAAPAAREIYEGIYGIKRTPAV
PGGRLTTKLPVFRPDGTVAPR
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatgcggacccggctgctggtgctgcacgtgctggtgctggcgctgctcgtg
gtgctgatcgggcggctctaccaggtgcaggtggtgcacgggcaggagttcgtgacgcgg
gcgacggagaccaggacgcgcacggtgatcgtgccggccgtgcgcgggcagatcctcgac
tcctccgggcggccgctggtgcgcaaccgtacggcgctggtggtgtcggtggaccgcgcg
ctgctgtccaggacgcccgacggcggcctgaaggtgctgaccaagctgtcgcaggtgctc
ggcaggccggtgcaggagctgcagcggaagatcacgccgtgcgggccgaaggtgccgaag
ccgtgctggacgggctcgccctaccagccggtgccgctggacgagaaggtggacacccgg
gaggcgctgcagatcctggagcgccaggaggagttccccggggtgacggccgagatccac
tcggtccggcagtaccccggcggccgggccggcgcgcagatgctgggctacctgcagccg
gtgaccgaggaggagctggagaagcgcgaagggctcaaggccgccttctccggcgtcgac
ctggccgggcgtgacgggctggagtacgtctacgacgacgcgctgcgcggcaaggccggg
ctgcgccgggtgcaggtcgaccggatgggcaaggcgctcggggtggaggaccaggtcacg
cccatccctggcgaccacctggtgaccagcatcgactcgcgcatccagacggtgaccgag
aaggccctcgccaaggccatgaagtccgcgccgcaggccgacggcggggccgcggtggtg
ctcgacgcgcggagcggcagggtggtggcgttggccagccagcccaactacgacccggag
atctggggcggcggcatctcggcgcgcggctaccagtggctgatgtcggagaagtcgggc
aagccgctggtgtcgcgggcgatcaacgggcagttcgcgccgggttcgacgttcaagatc
tcgtcggtgacgtcgatgttgcgggccggctatccgctgaacggcacctacgactgcgcg
gggtcgtacaacgtgggcgggcgcgccttcaacaacttccgcggcatcgggctgggcccg
atgaacctgcacacggcgctggtgaagtcgtgcgacacgatcttctatcgggcggcgtac
gagcagtacctcaaggacggcgggcgctatccgaagaagacgccgaaggaggtcttcgcc
aacaccgccagggccttcgggttcggccggcccacgggcgtcgacctgccgggcgagtcc
ggtggccgcattccggaccgggcgtggaagaagaacctgtggaaccagaccagcgcgatc
aactgcgagcgctcgcgcaagggctatccggaggtcaaggaccgggcgcgggcggagttc
ctgaagcggctggcgctcgagaactgcaccgaggggttcctgctgcggccaggcgactcg
gccaacttctccatcggccagggcgacgtgctggtgacgccgatgcagctcgcgcgggcc
tacatggcgctggtcagcgacgggaagctgcgcagcccgcgcatcggctgggcccaggtg
cggcccgacggcaaggtggtcaggaccatccccgtgccggtggtcggcaagctgccgctg
agcgagaaggagcggcgctacatcaagaacgcgctcagccaggtcgcccaggacggcacc
gcggccggggcgttcgccggcttcccgatggacaaggtgcgcgtgggcggcaagaccggc
accgcggaggtgtggggcaagcaggacacctcgtggttcgcctcgttcgcgccgacgaag
aacccgcagtacgtcgtggtcgtcatggtctcccagggcggcatgggcgcgcagaccgcc
gcgcccgccgcgcgtgagatctacgagggcatctacggcatcaaacggaccccggccgtg
cccgggggcaggctcaccaccaagctgccggtcttccggcccgacggaacggtggcgcct
cgatga
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