Nonomuraea coxensis: Nocox_36300
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Entry
Nocox_36300 CDS
T07466
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ncx
Nonomuraea coxensis
Pathway
ncx03420
Nucleotide excision repair
ncx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Nocox_36300 (pcrA)
03430 Mismatch repair
Nocox_36300 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncx03400
]
Nocox_36300 (pcrA)
Enzymes [BR:
ncx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nocox_36300 (pcrA)
DNA repair and recombination proteins [BR:
ncx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nocox_36300 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Nocox_36300 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QYC44814
UniProt:
A0ABX8UDE4
LinkDB
All DBs
Position
complement(7770516..7773806)
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AA seq
1096 aa
AA seq
DB search
MLTPAELAGKLGVLPPTTEQAAVIEAPLEPMVVMAGAGSGKSETMAGRVVWLVANGLVKP
ANVLGLTFTRKAAAELATRVRERLTGLAEAGLVEPGALDDEPTVSTYHAYAARLVTDHAL
REGLEPTMRLVTPAVSWQLASRVVASYDGPMDRVELGPPSVTAALLELAGELSEHLRGPD
DVRRVGEWLRERLARVPGRTTLAQRRPLAVQAAREQLLPLVEAYERLKRRREVIDYGDQM
ALAARIAARHKEVGEIERERYAVVLLDEYQDTSHAQLVLLRSLFGDGHPVTAVGDPCQSI
YGWRGASAGNLRRFSRDFRTGTGDPAPVRQLSVSFRNGDRVLDVAARVQLPLRMEAREVP
VLVPGPNRVERGRVTCAFHETAEDEARWVADGIAKILGQEVAPDGLPWGDKERKKTLALQ
PQDVAILARRRSQFPALRRALEERDIPVEVVGLGGLLTVPEVNDIVATLRVLYDATAGDA
LARLLAGPRWRIGPADLRALGECARELARELSESERATDPLDQVVADLAEERGSLVDALD
ELPDREEWLAAFSPLARTRLVALAQELRQLRAHAAQPLPDLITEVERRLGLDIEVAARSG
TAGAFAARADLDAFIDAASRFAGDAEDPTLGAFLAYLQAAESEEFGLEAGRVGESNSVKL
MTVHASKGLEWPVVVVPGLSQLVSSKGHVATGSVFPASPVMNSRWTENPRKLPYPLRGDA
ADLPRLGGLGKDDLAVFDELCRERDLTEERRLAYVAVTRAHYHLIASGYRWGSATKPLEP
SEFLLEIRDTADRVAVWAGDVAEGVANPLLAEPAEAVWPVTPEGLRYESVLDGARLVEDV
LSGALGEDDDEDDEPVRAYEQERMRAWERDTDLLLRERERHLRRPPTIVELPAKLTVSSL
VTLAADPRELARRIRRPVPVKPAPLARRGTSFHRWLETRWDQQRLIDDFELYDELEPEEA
DVRLAELQERFERSEWADRRPVDLEIPFETMIGDRVVRGRMDAVFATPDGGYEVVDWKTG
QPPRGKAAKAASVQLAAYRMAWSHLAGVPLERVGAAFHYVRAGRTVRPVDLLDEAGLVAL
VESVRSEDDETPASGA
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
gtgctgacccccgccgaactcgccggcaagctcggcgtccttccccccacgaccgagcag
gcggcggtcatcgaggcgcccctggagccgatggtcgtcatggccggcgccggctccggc
aagagcgagaccatggcgggacgggtggtctggctggtcgccaacggcctggtcaagccc
gcgaacgtgctgggcctgacgttcacccgcaaggccgccgccgagctcgccacccgcgtg
cgcgagcgcctgaccggcctggccgaggcgggcctggtcgagcccggcgcgctcgacgac
gagccgacggtctccacctaccacgcctacgccgcccgcctcgtcaccgaccacgcgctg
cgcgagggcctggagccgaccatgcgcctggtcaccccggcggtgtcgtggcagctcgcc
tcgcgcgtggtcgcctcctacgacgggccgatggaccgcgtcgagctgggcccgccctcg
gtcacggcggccctgctggagctggcgggcgagctgtcggagcacctgcgcggccccgac
gacgtgcgccgggtgggggagtggctgcgcgagcggctggcccgcgtccccggccgcacc
acgctcgcgcagcgccggccgctcgccgtccaggcggccagggagcagctgctgccgctg
gtggaggcgtacgagcggctcaagcgccgccgggaggtcatcgactacggcgaccagatg
gccctcgccgcccggatcgcggcccgccacaaggaggtcggcgagatcgagcgcgagcgc
tacgcggtcgtgctgctcgacgagtaccaggacaccagccacgcccagctcgtcctgctg
cgctcgctgttcggcgacgggcatccggtgacggccgtcggcgacccctgccagtccatc
tacggctggcgcggcgcgtccgcgggcaacctgcgccgcttctcccgcgacttccgcacc
ggtacgggagacccggcccccgtgcgccagctcagcgtcagcttccgcaacggcgaccgg
gtgctcgacgtggccgcccgcgtccagctcccgctgcgcatggaggcgcgcgaggtgccg
gtcctggtgcccggccccaaccgggtcgaacgcggccgggtgacctgcgccttccacgag
accgccgaggacgaggcccgatgggtcgccgacggcatcgcgaagatcctcggccaggag
gtcgcccccgacggcctgccctggggcgacaaggagcgcaagaagaccctcgcgctccag
ccccaggacgtcgccatcctggcccgccgccgctcccagttccccgcgctgcgccgggcg
ctggaggagcgcgacatcccggtcgaggtggtcggactcggcggcctgctgaccgtgccc
gaggtcaacgacatcgtggccaccctccgcgtgctctacgacgccaccgcgggcgacgcc
ctcgcccggctgctggccgggccgcgctggcggatcggccccgccgacctgcgggcgctc
ggcgagtgcgcccgcgagctggcccgcgagctgagcgagagcgaacgcgccaccgacccg
ctcgaccaggtggtggccgacctcgccgaggagcgcggcagcctggtggacgccctcgac
gagctgcccgaccgcgaggagtggctggcggcgttctccccgctggcccgtacccggctg
gtcgcgctcgcgcaggagctgcgccagctccgcgcgcacgccgcgcagccgctgcccgac
ctgatcaccgaggtggagcgcaggctcggcctcgacatcgaggtggcggcccgcagcggc
acggcgggcgcgttcgcggcgcgggccgacctcgacgccttcatcgacgcggcctcccgc
ttcgccggcgacgccgaggacccgacgctcggggcgttcctcgcctatctgcaggcggcc
gagagcgaggagttcgggctggaggccgggcgggtcggcgagagcaacagcgtcaagctc
atgaccgtgcacgcctccaagggcctggagtggccggtcgtggtggtgccggggctgtcg
cagctcgtcagctccaaggggcacgtcgcgaccggcagcgtcttccccgcctcgccggtc
atgaacagccggtggacggagaacccgcgcaagctgccgtacccgctgcgcggcgacgcc
gccgacctgccgcgtctcggcggcctcggcaaggacgacctcgcggtcttcgacgagctg
tgccgcgagcgggacctgacggaggaacgcaggctcgcctacgtcgccgtcacccgcgcc
cactaccacctcatcgcctccggctaccgctggggcagcgccaccaagccgctggagccc
tcggagttcctgctggagatccgcgacaccgccgaccgggtcgcggtctgggccggcgac
gtcgccgagggcgtggccaacccgctgctcgccgagcccgccgaggccgtctggccggtc
acgcccgagggcctgcgctacgagtccgtgctcgacggcgcccggctcgtcgaggacgtc
ctgtcaggggcgctcggcgaggacgacgacgaggacgacgagcccgtacgcgcctacgag
caggagcgcatgcgggcctgggaacgcgacaccgacctgctgctgcgcgagcgcgagcgg
cacctgcgccgcccgcccacgatcgtcgagctgcccgccaagctgaccgtctcgtcgctg
gtcacgctggccgccgacccgcgcgagctggcccgcaggatccgccgcccggtgccggtc
aagccggcgccgctggcccggcgcggcacctccttccaccggtggctggagacgcgctgg
gaccagcagcggctcatcgacgacttcgagctctacgacgagctggagccggaggaggcc
gacgtgcgcctggccgagctgcaggagcgcttcgagcgcagcgagtgggccgaccggcgg
ccggtggacctggagatcccgttcgagaccatgatcggcgaccgggtggtgcgggggcgc
atggacgcggtcttcgccacgccggacggcggctacgaggtcgtcgactggaagaccggg
cagccgccgcgggggaaggcggcgaaggcggcgtcggtgcagctcgcggcgtaccggatg
gcctggtcgcacctggcgggggtgccgctggagcgggtgggcgcggccttccactacgtg
cgcgccggccgcaccgtccggccggtggacctgctggacgaggccgggctggtcgcgctc
gtggagagcgtcaggagcgaagatgatgaaacgccggcttcgggtgcatga
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