Nonomuraea coxensis: Nocox_42355
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Entry
Nocox_42355 CDS
T07466
Symbol
end
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ncx
Nonomuraea coxensis
Pathway
ncx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nocox_42355 (end)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncx03400
]
Nocox_42355 (end)
Enzymes [BR:
ncx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Nocox_42355 (end)
DNA repair and recombination proteins [BR:
ncx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Nocox_42355 (end)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QYC46008
LinkDB
All DBs
Position
9040267..9041010
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AA seq
247 aa
AA seq
DB search
MVRIGAHVDQDDPAARAAEIGAEVVQFFLGDPQGYAKPVLPAKPVEGVDVYIHAPYLINV
ATTNNRIRIPSRKLLEQHLKAAAGLGAKGLVVHGGHVNKSDDPQTGFDNWRKVFERMECP
IPVLIENTAGGGNAMARTLERIGRLWDALDGFDVGFCLDTCHAHAGGEELVGLVERVKAI
TGRIDLVHCNDSRDEFGSGADRHANLGQGRIDPELILAVCRAAGAPVVVETPGDGQADDI
AFLRKNL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcatcggagctcatgtcgatcaggacgacccggccgcccgggccgcggagatc
ggcgcggaggtggtccagttcttcctcggcgatccgcagggctacgccaagccggtgctg
cccgccaagccggtcgaaggcgtcgacgtctacatccacgccccctacctgatcaacgtg
gcgaccaccaacaaccgcatcaggatccccagccgcaagctgctggagcagcatctcaag
gccgccgcggggctgggcgcgaagggcctggtggtgcacggcgggcacgtcaacaagagc
gacgacccgcagacgggcttcgacaactggcgcaaggtgttcgagcgcatggagtgcccg
atccccgtgctgatcgagaacaccgcgggcggcggcaacgccatggcccgcacgctggag
cgcatcggccggctctgggacgccctcgacggcttcgacgtcggcttctgcctcgacacc
tgccacgcgcacgcgggcggcgaggagctggtcggcctggtcgagcgggtcaaggccatc
accggccggatcgacctcgtccactgcaacgactcccgcgacgagttcggctccggcgcc
gaccggcacgccaacctcggtcagggcaggatcgacccggagctgatcctggcggtctgc
cgggcggccggcgcgccggtggtggtggagacgccgggcgacggccaggcggacgacatc
gcgttcctgaggaagaacctgtga
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