Nocardia cyriacigeorgica: NOCYR_0361
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Entry
NOCYR_0361 CDS
T01756
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ncy
Nocardia cyriacigeorgica
Brite
KEGG Orthology (KO) [BR:
ncy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncy03032
]
NOCYR_0361 (topA)
03400 DNA repair and recombination proteins [BR:
ncy03400
]
NOCYR_0361 (topA)
Enzymes [BR:
ncy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NOCYR_0361 (topA)
DNA replication proteins [BR:
ncy03032
]
Prokaryotic type
DNA Topoisomerases
NOCYR_0361 (topA)
DNA repair and recombination proteins [BR:
ncy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NOCYR_0361 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CCF61181
UniProt:
H6R9X3
LinkDB
All DBs
Position
405056..407878
Genome browser
AA seq
940 aa
AA seq
DB search
MIVESPTKARKIAPYLGRNYTVEASVGHIRDLPRGAADVPAKYKGQPWARLGVDVDHDFE
PIYVVSPDKKGKVTELKSLLKDADELYLATDPDREGEAIAWHLLETLKPKIPVRRMVFHE
ITEPAIQAAAADTRDLDSDLVDAQETRRILDRLYGYEVSPVLWKKVMPRLSAGRVQSVAT
RVIVRRERERMAFRSAEYWDIAAKLDAGETGEVGNPRTFGARLVNVDGARVASGRDFGSD
GQLKADSGVVVLDEAYARRLAEALDGADLVVSSAEAKPYSRKPYAPFMTSTLQQEAGRKL
RFTSERTMRVAQRLYENGYITYMRTDSTTLSQSAINAARSQATQLYGAEYVHPTARQYNR
KVKNAQEAHEAIRPAGDTFATPGELHARLDNDEFRLYELIWQRTVASQMADAKGTTLTLR
ITGVAGTGEECVFSASGRTITFPGFLKAYVESVDEEAGGQSDDAESRLPALAEGQGVTAV
ELNPDGHSTNPPARYTEASLIKALEELGIGRPSTYSSIIKTILDRGYVYKRGSALVPSWV
AFAVVGLLEEHFGRLVDFDFTAAMEDDLDAIAGGREQRGNWLSSFYFGGDHGADGSVARS
GGLKKMVGDRLDDIDAREVNSIKLFTDAENRDVVVRVGRYGPYLERMVTNPDDPEGDSIS
QRANLPDDLPPDELTPEVAEKLFATPQEGRSLGTDPATGHEIVAKEGRFGPYVTEILPEP
AEEPAPAKKTAKKAAAPKPRTGSLFKSMDLATITLDDALKLLSLPRVVGTDPASGEEITA
QNGRYGPYLKKGTDSRSLADEDQIFNITLDEALKIYAEPKRRGRQAASAAPLRELGNDPA
SGKPMVIKDGRFGPYVTDGETNASLRKGDEVESITDERAAELLADRRARGPVKKAAKKTT
KKAAAKKTAAKSTAAKKTAAKKTPAKKAPAKKSAAKAVSD
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtcgagtccccgactaaggcccgcaaaatcgcgccctatctgggtcgcaattac
acggtggaggcttctgtcggtcatatccgcgacctgccgcgtggcgcggcggatgtgccc
gccaagtacaagggccagccctgggcgcgtctcggcgtcgacgtcgatcacgatttcgag
ccgatctatgtcgtcagcccggataagaagggcaaggtcaccgagctcaagagcctgctc
aaggacgccgacgagctctatctggccaccgaccccgaccgcgagggcgaggccatcgcc
tggcacctgctggaaaccctcaagccgaagattccggtccggcgaatggtgttccacgag
atcaccgagcccgccattcaggccgcggccgccgacacccgggatctggacagcgacctg
gtcgatgcgcaggagacccgccgcatcctggaccggctctacggctacgaagtcagcccg
gttttgtggaagaaggtcatgccgcggttgtcggcgggccgggtgcagtccgtggcgacc
agggtgatcgttcgccgcgagcgcgagcggatggcgttccggtcggccgagtactgggat
atcgccgccaagctggacgcgggcgagaccggcgaggtgggcaacccgcgcaccttcggc
gcccggctggtcaatgtcgacggtgcccgcgttgcctccggccgcgatttcggttccgac
ggccagctgaaggccgactcgggtgtggtcgtgctggacgaggcctacgcgcggcggctc
gccgaagcgctcgacggcgccgacctggtggtttcctccgccgaagccaagccgtactcg
cgcaagccgtacgcgccgttcatgacctccacgctgcaacaggaggccggccgcaagctg
cggttcacctccgaacgcaccatgcgggtggcgcagcggctgtacgagaacggctacatc
acctacatgcgtaccgactcgaccacgctgtcgcagtcggccatcaacgcggcccgctcg
caggccacccagctctacggtgccgaatacgtgcatccgacggcccgccagtacaaccgc
aaggtcaagaacgcgcaggaagcgcacgaggcgatccgcccggccggcgataccttcgcc
accccgggtgagctgcacgcccgcctcgacaacgacgagttccggctctacgagctgatc
tggcagcgcaccgtcgcctcgcagatggccgacgccaagggcaccacgctcacgctgcgg
atcaccggcgtcgcgggcaccggcgaggaatgcgtgttctccgcttccggccgcaccatc
accttccccggcttcctcaaggcctatgtcgagagtgtggacgaggaggcgggcggccaa
tccgacgacgccgaatcacgcctgcccgccctcgccgagggccagggcgtcaccgcggtc
gagttgaacccggacgggcacagcaccaatccgcccgcccgctacaccgaagcctcgctg
atcaaggccttggaagaactcggcatcggccgtccgtccacgtattcctcgatcatcaag
acgatcctggaccgcggttacgtctacaagcgcggtagtgcgctggtgccgtcgtgggtg
gcgttcgcggtggtcggcctgctcgaggagcacttcggccggctggtcgacttcgacttc
accgcggccatggaagacgatctcgacgccatcgccggcggtcgcgagcagcgcggaaac
tggttgtccagcttctatttcggcggcgatcacggtgccgacggctccgtcgcgcgctcg
ggtggactgaagaagatggtcggcgatcggctcgacgacatcgatgcccgcgaggtcaac
tcgatcaagctgttcaccgatgccgaaaaccgtgacgtggtggtgcgagtcggccgttac
ggcccgtacctggagcggatggtcaccaatcccgatgatccggaaggtgattcgatctcg
cagcgggccaacctgcccgacgatctgccgcccgacgagctgacgcccgaggttgccgag
aagctgttcgcgacgccgcaagaaggccggtcgttgggcaccgatccggccaccgggcac
gaaatcgtcgccaaggaaggacgtttcggcccatacgtcaccgagatcttgccggaacct
gccgaagagcccgcaccggcgaagaagaccgcgaagaaggcggcggccccgaagccgcgc
accggatcgctgttcaaatccatggatctggccaccatcaccctcgacgacgcgctgaaa
ctgctgtcgctgccgcgggtggtcggcaccgatccggcctccggtgaggagatcaccgcc
cagaacgggcggtacgggccgtacctgaagaagggcaccgactcccgttcgctggccgac
gaggaccagattttcaacatcacgctcgacgaggctttgaagatctacgccgagcccaaa
cgccgtggcaggcaggccgccagcgccgcaccgttgcgcgaactcggcaacgatccggcc
agcggtaagccgatggtgatcaaggacggacgcttcggcccctacgtcaccgacggtgag
accaatgccagcctgcgcaagggcgacgaggtcgagtcgatcaccgacgagcgggcggcc
gagctgctggccgatcgccgcgcgcgtgggccggtgaagaaggcggcgaagaagaccacc
aagaaggcggccgcgaagaagaccgccgccaagtccaccgccgcgaagaagacggcggcg
aagaagacccctgccaagaaggcgccggctaagaagtctgcggctaaggcggtttcggac
tag
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