Nocardia cyriacigeorgica: NOCYR_1838
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Entry
NOCYR_1838 CDS
T01756
Name
(GenBank) DNA-directed DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ncy
Nocardia cyriacigeorgica
Pathway
ncy03030
DNA replication
ncy03430
Mismatch repair
ncy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NOCYR_1838
03430 Mismatch repair
NOCYR_1838
03440 Homologous recombination
NOCYR_1838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncy03032
]
NOCYR_1838
03400 DNA repair and recombination proteins [BR:
ncy03400
]
NOCYR_1838
Enzymes [BR:
ncy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NOCYR_1838
DNA replication proteins [BR:
ncy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NOCYR_1838
DNA repair and recombination proteins [BR:
ncy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NOCYR_1838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
DEDDh_C
UVR
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CCF62624
UniProt:
H6RC88
LinkDB
All DBs
Position
2054392..2056143
Genome browser
AA seq
583 aa
AA seq
DB search
MSDSVPRRRAAAQLAFDELDTPLYDTTFVVVDLETTGTSPESDAITEIGAVKVRGGEVLG
EFATLVDPGRAIPPAVVHVTGITTAMVCAAPPIEAVLPGFLEFAAGAVLVAHNARFDMAF
LRAAAARCGTPWPAAQVVCTVRLARRVLARDEAPSVRLSVLARVLGASTQPTHRALADAR
ATVDVLHALMARVGNQGVHSLTELIDYLPDVSSGQRAKRGLAADLPASPGVYLFRGPSDE
VLYIGTAVNLRRRVRNYFTGSETRGRIKEMVALATRVDHVECAHGLEAGVRELRLLVAHA
PPYNRRSKFPKRGWWITLTEEAFPRFAIVRAPAAEALGPFGARADAADVAATIAEFSGLR
TCTTRLSRTAIHDCPPAAVGGCPAAADGMTRNSKEYASAPAAVRALFAGTDDTVLRMVLE
QIRTRSAAEHFEAAARLRDRAVTVIRALYRTQRLAAVARIAELVAAHPDGAGGWEFAVIR
FGRLAGAGTAARGVAPMPVVERIVAAAETVVCDGDLSPLRGGSPEEVGLVVRWLARPGVR
IVRTSEGYCEPAHGAGAWQAWVATAEAAAAAESAAQDYERMSG
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgactccgtcccgcgccgccgcgccgccgcgcaactggccttcgacgagctcgac
accccgctctacgacaccaccttcgtggtcgtcgacctggaaaccaccggcaccagcccg
gaatcggacgccatcaccgagatcggtgcggtcaaggtgcgcggcggcgaggtgctcggt
gaattcgccaccctggtcgaccccggacgcgccatcccgcccgcggtcgtgcacgtcacc
ggcatcaccactgccatggtctgcgccgccccgccgatcgaagcggtgctgcccggcttc
ctggagttcgcggccggcgcggtgctcgtcgcgcacaatgcccgattcgatatggcgttc
ctgcgcgccgcggctgctcgctgcggcacgccctggcccgccgcccaggtggtgtgcacc
gtgcgcctcgcgcgccgggtgctggcccgcgacgaggcgccgtcggtgcggttgagcgtg
ctggccagggtgctcggcgcgagcacccagcccactcatcgcgctctcgccgatgcccgc
gccaccgtcgacgtcctgcacgcgctgatggcgcgggtgggcaatcagggcgtgcacagc
ctcaccgagctgatcgactacctgcccgacgtcagctcggggcagcgcgccaaacgtggg
ctggccgccgacttgcccgcgagccccggggtctatctgttccgtggaccgtccgatgaa
gtcctctatatagggacggcggtgaacctgcgccgccgcgtgcgcaactacttcaccggc
tcggagacccggggccggatcaaggagatggtcgcgctggccacccgcgtcgatcacgtc
gaatgcgcgcacggcctcgaggcgggggtgcgcgagttgcggctgctggtcgcgcatgcg
ccgccgtacaaccggcgctcgaagtttcccaagcgcggctggtggatcaccctcaccgag
gaggcgtttccgcgcttcgcgatcgtgcgcgcgccggccgccgaggcgctcggacccttc
ggcgcccgagccgacgccgctgacgtcgccgccaccatcgccgagttcagcgggctgcgc
acctgcacaactcggttgtcgcgcacggcaattcacgactgcccgcccgccgccgtcggt
ggctgcccggccgcggccgatggaatgacccgtaatagtaaggaatacgcgtccgcgccc
gccgccgtgcgcgcgctgttcgcgggcaccgacgacacggtcctgcgcatggtgctcgaa
cagatccgaacccgttccgccgccgaacatttcgaggcagctgcccggttgcgcgaccgc
gcggtgacggtgatccgcgcgctgtatcgtacccagcgcctggccgccgtcgcccgcatc
gccgaactcgtcgccgcgcaccccgacggcgcgggcggctgggaattcgcggtgatccgc
ttcggccgcctggcgggcgcgggcacggccgccaggggagtggcgccgatgccggtggtg
gaacggatcgtggccgccgcggaaaccgtggtctgcgacggtgatctgtcgccgctgcgt
ggcgggtcaccggaggaggtggggctggtcgtgcgctggctggcccggcccggtgtgcgg
atcgtgcgcaccagcgagggctactgcgaaccggcacacggcgcgggcgcatggcaggcc
tgggtcgcgacggccgaggccgcggcagccgctgagtccgcggcgcaggactacgaacgc
atgtccggctga
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