Nocardia cyriacigeorgica: NOCYR_2089
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Entry
NOCYR_2089 CDS
T01756
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ncy
Nocardia cyriacigeorgica
Pathway
ncy03030
DNA replication
ncy03410
Base excision repair
ncy03420
Nucleotide excision repair
ncy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NOCYR_2089 (polA)
03410 Base excision repair
NOCYR_2089 (polA)
03420 Nucleotide excision repair
NOCYR_2089 (polA)
03440 Homologous recombination
NOCYR_2089 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncy03032
]
NOCYR_2089 (polA)
03400 DNA repair and recombination proteins [BR:
ncy03400
]
NOCYR_2089 (polA)
Enzymes [BR:
ncy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NOCYR_2089 (polA)
DNA replication proteins [BR:
ncy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NOCYR_2089 (polA)
DNA repair and recombination proteins [BR:
ncy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NOCYR_2089 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NOCYR_2089 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
CCF62871
UniProt:
H6R008
LinkDB
All DBs
Position
2322078..2324741
Genome browser
AA seq
887 aa
AA seq
DB search
MLIDGHSVAYRAFYALPAENFKTVTGQTTNAVYGFTAMLINLLRDEKPTHIAAAFDVSRQ
TFRTEAYPEYKANRTSTPDEFRGQVELAKEVLGALGIPVMAIDGYEADDVIATLTTQAVP
QGYRVLIVTGDRDSIQLVNDDVTVLYPRKGVSDLTRFTPEEVQAKYGLSPAQYPDYAALR
GDPSDNLPGIPGVGEKTAAKWIREYGDLATLVDKVDEVRGKVGDALRANLSSVVLNRQLT
EMVRDVPLPYTPDQLAQAPWDRERIHRLFDDLEFRVLRDRLFETLAPPSPEAESGFEISG
SSLAPGSVGDWLTDHAPVGVRHGVSVVGSGAPAHGDVKAIAIAAADGEGAYIDVTGMTPE
DEARLGAWLADPARPKALHEAKSAIHALRGRGWSLAGLTSDTALAAYLVRPGQRSFNLDD
LSLRYLHRELRAETDETPQLSLLDDEDAVDTELAQTEMLRARAVADLAEALDGELAGIES
TALLGEMELPLLEVLATLEDAGIAVDVDQLETLQRQFADKVNEAAEAAYGVIGKQINLGS
PKQLQVVLFDELDMPKTKRTKTGYTTDADALESLYEKTEHPFLAHLLAHRDATRLKVTVD
GLLKSVADDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDTGRQIRDTFVVGPGYESLM
TADYSQIEMRIMAHLSGDAGLIEAFNSGEDLHTFVASKAFDIPISEVNPEMRRRIKAMSY
GLAYGLSSYGLSAQLKISTQEAKDQMEVYFARFGGIRDYLHEVVEQARKVGYTQTLFGRR
RYLPDLDSSNRQRREAAERMALNAPIQGTAADIIKVAMINVHKAIQDAGLQSRMLLQIHD
ELLFEVAPGEREALEELARREMAAAIDLSVPLDVSVGTGRSWDSAAH
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
ttgctgatcgacggccactcggtggcctaccgcgcgttctacgcgctaccggcggagaac
ttcaagaccgtcaccgggcagaccaccaacgcggtgtacgggttcaccgccatgctgatc
aacctgctgcgcgatgagaagcccacccatatcgcggcggcgttcgacgtctcgcgccag
accttccgcaccgaggcctacccggaatacaaggccaaccgcaccagcacgcccgacgag
ttccgcggccaggtcgagctcgccaaggaggtgctcggcgcgctcggcatcccggtgatg
gccatcgacggctacgaggccgacgacgtcatcgccacgctcaccacccaggcggtgccg
cagggctaccgggtactcatcgtcaccggcgaccgcgactcgattcagctggtcaacgac
gacgtcaccgtgctctacccgcgcaagggcgtctccgacctgacccgcttcacccccgag
gaagtgcaggccaaatacggcctcagcccggcgcagtaccccgactacgcggcgctgcgc
ggcgacccgagcgacaacttgcccggcatccccggggtgggggagaagacggctgccaag
tggatccgcgaatacggtgatctggccaccctggtcgacaaggtcgacgaggtgcgcggc
aaggtcggcgacgcgctgcgcgccaacctcagcagcgtggtgctcaaccgtcagctcacc
gagatggtgcgcgatgtgccgctgccctacacccccgaccagctcgctcaggccccgtgg
gaccgcgaacgcatccaccggctcttcgacgacctggaattccgggtgctgcgcgatcgg
ctgttcgagaccctcgccccgccgagcccggaggccgaatccggtttcgagatcagcggc
tcctcgctggcgccgggcagcgtcggcgactggctcaccgatcacgcgccggtcggcgtg
cgccacggtgtgtcggtggtggggtcgggtgcgcccgcgcacggcgacgtcaaggcgatc
gccatcgccgcggccgacggtgagggcgcctatatcgacgtcaccgggatgacgccggag
gacgaggcccgcctcggtgcctggctggccgacccggcccggcccaaggccctgcacgaa
gccaagtccgccatccacgccctgcgcgggcgcgggtggtcgctggccgggctcaccagc
gataccgcgctggccgcctacctggtgcggccggggcagcgcagcttcaacctcgacgat
ctgtcgttgcgctacctgcaccgcgagctgcgcgccgagaccgacgagaccccgcagctg
tcgttgctcgacgacgaagacgccgtcgataccgaactcgcgcagaccgagatgctgcgg
gcccgcgccgtcgccgacctggccgaggccctcgacggcgagctggccggcatcgaatcc
accgcgctgctcggcgaaatggagctgccgctactggaagtgctggccaccctcgaagac
gcgggcatcgccgtcgacgtcgaccagctcgagacgctgcaacgccagttcgccgacaag
gtgaacgaggcggccgaggcggcctacggggtgatcggcaagcagatcaacctcggctcg
cccaagcagttgcaggtggtgctgttcgacgagctcgacatgcccaagaccaaacgcacc
aagaccggctacaccaccgacgccgacgcgctggaatcgctctacgagaagaccgagcac
ccgttcctggcgcatctgctggcccaccgcgacgccacccggctcaaggtcaccgtggac
gggctgctcaaatccgtcgccgacgacggccgcatccacaccacgttcaaccagaccatc
gccgccaccggccggttgtcgtcgaccgagccgaacttgcagaacattcccatccgcacc
gacaccggcaggcagattcgcgacaccttcgtcgtcggccccggttacgaatcgctgatg
acggccgactacagccagatcgagatgcggatcatggcgcatctgtccggcgacgccggc
ctgatcgaggccttcaactccggggaggacctgcacaccttcgtcgcgtccaaggccttc
gacatcccgatctcggaagtcaatccggagatgcggcgccggatcaaggccatgtcgtac
ggtctggcctacggtttgagctcctacggtctgtccgcgcagctgaagatcagcacgcag
gaggccaaggatcagatggaggtctacttcgcccggttcggcggtatccgcgattacctg
cacgaggttgtggaacaggcccgcaaggtcggctacacccagacgctgttcggccgccgc
cgctatctgccggacctcgattccagcaaccgccagcgtcgtgaagctgccgagcgcatg
gcgttgaacgcgccgatccagggcaccgccgccgacatcatcaaggtcgcgatgatcaac
gtgcacaaggcgattcaggatgcgggcttgcagtcgcggatgctgctgcagatccacgac
gaactgctgttcgaggtggctccgggggaacgggaagccctcgaagagctggcccggcgc
gaaatggccgcagcgatcgacctgtcggtcccgctcgatgtgtccgtgggcaccgggcgc
agctgggactcggccgcacactga
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