Nocardia cyriacigeorgica: NOCYR_2350
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Entry
NOCYR_2350 CDS
T01756
Symbol
recB
Name
(GenBank) RecB protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ncy
Nocardia cyriacigeorgica
Pathway
ncy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NOCYR_2350 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncy03400
]
NOCYR_2350 (recB)
Enzymes [BR:
ncy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NOCYR_2350 (recB)
DNA repair and recombination proteins [BR:
ncy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NOCYR_2350 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
CCF63127
UniProt:
H6R2T3
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All DBs
Position
2601779..2605102
Genome browser
AA seq
1107 aa
AA seq
DB search
MTIHTTPVAAPQIDTAFDPIGPLPTGTTVLEASAGTGKTYAIVGLAVRYVAETGIDISQL
LLVTFSRAATQELRERTRSRFVTVAAALADPVAARSSGDGLIEYLATADEDEVWRRRARL
LAALSDFDAGAIATTHSFCQRMLDELGLAGEHDMRSRLVENVDELVGTVADDLYLHRYAR
TTPPFTIKEAHTLALAAVRDRHARLVPDTDDLAGERVAFALAVRAETERRKRLAGLRDFD
DLLVLLHEVLTDPEHGPRACLRIRDRFRVALVDEFQDTDPLQWDILRRVFHGHTTMVLVG
DPKQAIYAFRGAEVLSYLDAVGHAETRRELTVNWRSDAGLLRAIDQVMGGAALGHDAITV
YPVAATRPWSRLSAPDRTPAPLRLRVLPRTGAGPLNKTGFPTVGRMRAKVATDLAADIVR
LLESGTTIEAAGEANPRPVGPGDIAVLVRTRSQIDVVREALDRVGVASVLAGGTSVFATE
SATDWLWVLRALEQPHRSDRVRLAACTPLLGITAAEIDSGGADLVGRVSAQLREAARLFT
RAGFAAVFEKLSAESELAPRLLGIENGERRLTDLRHIAQLLDQLAVSEGYGLTALTRWLA
DRVRDPASGAVADRSRRLDRDAAAVQIATVHASKGLEFPVVYLPFAWDSARNPKAATLLF
HDDEIRVLDVGGPDAPGYNERKRRAEAEEAGEELRLLYVALTRAMCQVVAWWAPAFTTDN
APLHRMLLGRSGGAEQVAQRVPVPKDSVVAERLSAWADAAGPSVEVEVVDGEQQVQPRRV
RVETMTGDLAAATFDRTLDQQWRRTSYSALTAAAHAVAPDSEPEDGRGPDDEPTGVPVLA
SEPETGAPSLMNELPYGAEFGTLVHAVLERVDTDAADLAAEVEARCRETIEEMMAAADPA
QLAVALLAVLRTPSPFGALADISTRDRLCELEFELPLAGGDTASEQAATLRAIAALLREH
LSPTDDFAPYADHLDALDDNPLRGYLTGSIDAVLRVADGRFVIVDYKTNRLGTGDLTVEH
YTRDRMGAEMMRSHYPLQALLYSVALHRYLRWRLPGYDPARHLGGAAYLFVRGMIGPDTP
PGRGVFDWTPPATLITALSDLLAGGSR
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccacaccacgcccgtcgccgcgccgcagatcgacaccgccttcgacccgatc
gggccgctgcccaccggcaccaccgtgctcgaggccagcgcgggcaccggtaagacgtat
gcgatcgtcggactcgccgtccgctacgtcgccgaaaccggaatcgatatctcgcaactg
ctgctggtgaccttcagccgggcggccacccaggaactgcgcgaacgcacccgcagccgg
ttcgtcaccgtcgccgctgctctggccgatccggtggccgccaggtcgagcggagatggc
ctgatcgaatatctcgccaccgccgacgaggacgaagtctggcggcgacgggcccggctg
ctggccgcgctgtcggatttcgatgccggcgccatcgccaccacgcacagtttctgtcag
cgcatgctcgatgagctggggttggcgggcgaacacgatatgcggtcgcggctggtcgag
aacgtcgacgaactggtcggcaccgtcgccgacgacctgtacctgcaccggtacgcgcgc
accacgccgccgttcaccatcaaagaggcgcacaccctggccttggccgcggtccgggac
cggcatgcgcggctggttcccgacaccgacgacctggccggggaacgggtggcgttcgcg
ctggccgtgcgcgcggaaaccgaacgccgcaaacgtcttgcgggcctgcgcgatttcgac
gatctgctggtgctgctgcacgaggtgctgaccgatcccgagcacggcccgcgcgcctgc
ctgcgcatccgcgaccggttccgggtcgcgctggtcgacgagttccaggacaccgacccg
ctgcagtgggacatcctgcgccgcgtcttccacggccacaccaccatggtgctcgtcggc
gaccccaaacaggccatctacgccttccgcggcgccgaggtgctgagctacctcgatgct
gtcggacatgccgagacccgccgggaactgacggtgaactggcgcagcgatgccggtctg
ctcagggccatcgaccaggtgatgggcggggccgcgctgggccacgacgccatcaccgtc
tatcccgtggctgccacccggccgtggtcgcgcctgtccgcgccggatcgcacgccggca
ccgttgcggctgcgggtgctgccgcgcaccggggccggaccgctgaacaaaaccggattc
ccgaccgtcggccggatgcgggcgaaggtcgccaccgatctggcggccgatatcgtgcgg
ttgctggaatccggcaccacgatcgaggccgccggcgaggcgaatccgcgaccggtcggc
ccgggcgacatcgcggtactggtgcgcacgcgctcccagatcgacgtggtgcgtgaggcg
ctggatcgggtcggcgtcgcctccgtgctggcgggcgggaccagcgtgttcgcgaccgag
agcgccaccgattggctgtgggtcctgcgggcgttggagcagccgcatcgcagcgaccgg
gtgcggctggcggcgtgcacgccgctgctcgggatcaccgcagccgaaatcgacagtggg
ggagcggatctggtcggccgtgtcagtgcccagctgcgtgaggcagctcggctgttcacc
cgggccgggttcgcggcggtgttcgaaaagctgtcggcggagtcggagctggcgccgcgc
ctgctggggatcgagaacggggaacgccggctcaccgatctgcggcatatcgcacaactg
ctcgatcagctggccgtctcggaaggttatggcctgaccgcgctgacgcgctggctggcc
gaccgggtccgcgatccggcctccggcgccgtcgccgaccgcagccggcggctcgaccgg
gacgcggccgcggtgcagatcgccaccgtgcacgccagcaagggcctggaattcccggtc
gtgtacctgccattcgcctgggacagtgcccgcaatcccaaggccgcgacactgctgttc
cacgacgacgagatccgcgttctcgacgtgggcggccccgacgcacccggctacaacgag
cgcaaacgccgcgccgaagccgaggaagcaggggaggagctgcgactgctgtatgtggcg
ctgacccgcgccatgtgtcaggtggtggcgtggtgggcgccggcgttcaccaccgacaac
gcgccgctgcatcggatgttgctcggtcgttccggcggcgccgagcaagtcgcgcaacgg
gtgccggttccgaaggactccgttgtggcagaacggctctcggcgtgggccgacgccgcg
gggccctcggtggaagtggaggtcgtcgacggcgaacaacaggtgcagccacggcgggta
cgggtggagacgatgaccggcgacctcgccgccgccaccttcgaccgcaccctcgaccag
cagtggcggcgcacctcctattcggcgctgaccgccgctgcgcacgccgtcgccccggac
agtgaacccgaggacggtcgcggacccgacgacgaaccgaccggcgtcccggtgctcgcc
tccgaacccgaaaccggtgcgccgtcgctgatgaacgagctgccctacggtgcggagttc
ggcaccctggtgcatgcggtgctcgaacgggtcgacaccgacgccgccgacctggcggcc
gaagtggaggcgcgctgccgggagacaatcgaggagatgatggccgccgccgaccccgcg
cagctggccgtcgcgctgctggccgttctacgtacgccgtcgccgttcggtgcgctcgcc
gacatcagcacccgggacaggttgtgcgagctggaattcgaactgcccctcgccggcggc
gacaccgcgagcgaacaggccgcgacattgcgcgccatcgcggccctgttgcgcgagcat
ctatcgcccaccgacgacttcgccccctatgccgaccacctcgatgctctcgacgacaat
ccgctgcgcggatacctgaccggcagcatcgacgcggtgctgcgcgtcgccgacgggcgt
ttcgtcatcgtcgactacaaaaccaaccggctcggcaccggcgatctcaccgtcgagcac
tacaccagggaccggatgggcgccgagatgatgcgctcgcactacccgctccaggccctg
ctgtattccgttgcgctgcaccggtatctgcgctggcggctgccaggatacgatcccgca
cggcacctcggcggcgcggcctatctgttcgtgcgcggcatgatcgggccggacacaccg
cccgggcgcggggtgttcgactggactccgccggcgacattgatcaccgcgctgtcggat
ctgctcgcgggaggttcgcggtga
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