Nocardia cyriacigeorgica: NOCYR_3105
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Entry
NOCYR_3105 CDS
T01756
Name
(GenBank) putative DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ncy
Nocardia cyriacigeorgica
Brite
KEGG Orthology (KO) [BR:
ncy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncy03032
]
NOCYR_3105
03400 DNA repair and recombination proteins [BR:
ncy03400
]
NOCYR_3105
Enzymes [BR:
ncy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NOCYR_3105
DNA replication proteins [BR:
ncy03032
]
Prokaryotic type
DNA Topoisomerases
NOCYR_3105
DNA repair and recombination proteins [BR:
ncy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NOCYR_3105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
CCF63871
UniProt:
H6RCD1
LinkDB
All DBs
Position
complement(3459686..3460699)
Genome browser
AA seq
337 aa
AA seq
DB search
MRLRRSRPYGPGISRIARGRGFSYVLDSGDPVDDAETLERIRALVIPPAWRKVWICPYPN
GHIQAVGVDAAGRRQYLYHQRWRRERDEEKFDRVLDLARRLPELRDRLAADLDLRGAARH
RVEALAISLVDRGVFRVGGEEYAEENGTRGVATLLRDQVRVSGDEMVFDYVAKGGIRRRV
RVHGAQPAKAVRTLRRLRTDTPRLLVYRDGTGYHELHAEEINARFKELTSPECTVKDLRT
WQGTVLAAAGFGSARRPQSQRGRRRVEREVFGQVADALGNTPSVARDSYIDPRVVEAFEN
GTTIAAALRRANRVDTDAERTAIIERAVIRLLRKAAG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagattgcggcgcagcaggccctacggcccgggcatcagcaggatcgcgcgtgggcgc
ggattctcctatgtgctcgattcgggggacccggtcgatgatgccgaaacgctcgagcgg
attcgcgcgctggtgatcccgccggcctggcgcaaggtgtggatctgcccgtatccgaat
ggtcatatccaagccgtcggggtggatgcggcgggccgccggcagtacctgtatcaccag
cggtggcgccgggaacgcgacgaggagaaattcgatcgggtgctcgatctggcacgccgg
ctaccagagctgcgcgaccggctcgcggccgatctggatctgcggggcgcggcgcgccat
cgggtcgaagccttggcgatcagtctggtcgatcgcggggtattccgggtcggcggtgag
gaatacgccgaggagaacggcacccgcggtgtggccacgctgctgcgcgatcaggtgcgg
gtctccggcgacgagatggtgttcgactacgtggccaagggcgggatccggcgccgggtc
cgcgtgcacggtgcgcagccggccaaggcggtgcgcaccctgcggcgcctacgcacggac
acaccgcggctgctggtctaccgtgacggcaccggctaccacgagctgcacgccgaggag
atcaacgcccgcttcaaggagctgaccagcccggaatgcaccgtgaaggatctgcggacc
tggcagggcacggtgctggcggccgccgggttcggctcggcgcgacgtccgcaatcacag
cgggggcgacggcgtgtcgaacgcgaggtcttcggacaggtcgccgacgccctcggcaac
acaccctccgtggcgcgagattcctacatcgatccgcgggtggtcgaggccttcgagaac
ggcacgacgatcgccgcggccctgcgccgcgccaaccgcgtcgacaccgacgccgaacgc
acggcgatcatcgaacgcgcggtgatccggctgctgcgcaaggccgcgggatga
DBGET
integrated database retrieval system
