Nocardia cyriacigeorgica: NOCYR_3898
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Entry
NOCYR_3898 CDS
T01756
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ncy
Nocardia cyriacigeorgica
Pathway
ncy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NOCYR_3898 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncy03400
]
NOCYR_3898 (mutM)
Enzymes [BR:
ncy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NOCYR_3898 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NOCYR_3898 (mutM)
DNA repair and recombination proteins [BR:
ncy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NOCYR_3898 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
TackOD1
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
CCF64661
UniProt:
H6R5X1
LinkDB
All DBs
Position
complement(4290989..4291855)
Genome browser
AA seq
288 aa
AA seq
DB search
MPELPEVEVVRRGLADHVVGHVIESVAVAHPRSVRRHLEGAADLAARLSGLRVTAAERRG
KYLWLTFDDPDLALVVHLGMSGQMLIRPAEAPVEKHAHIRATLDNGAELRFVDQRTFGGW
ALAELVEVDGTRVPEPVAHIARDPLDPRFDPEAVVAAIRAKNTEIKRVLLDQTVISGVGN
IYADEALWRAKLHGCRIASGLSRPVLHTLLADAAAVMRDALAAGGTSFDALYVDVNGDSG
YFERSLAVYGRADRPCPRCGAPIVREKFMNRSSFSCPRCQRKPRPRTR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaacttcccgaagtcgaggtcgtgcggcgcggtctggccgatcacgtggttggc
catgtcatcgaatcggtggccgtcgcccatccgcgctcggtgcgccgtcatctggaaggt
gccgccgacctcgccgcccggctgtccgggctgcgcgtcaccgccgccgaacgacgcggc
aaatacctgtggctgaccttcgacgatcccgatctcgcactggtcgtccacctcggcatg
agcgggcagatgctgatccggccggccgaggcgccggtggaaaagcacgcccacatccgg
gccaccctcgataacggcgccgagctgcgcttcgtcgaccagcgcaccttcggcggctgg
gcgctggccgagctggtcgaggtggacggcacccgcgtccccgaaccggttgcccatatc
gcccgcgacccgctggatccgcgcttcgaccccgaggccgtggtggccgcgatccgggcc
aagaacaccgagatcaaacgggtgctgctggatcagacggtcatttccggcgtcggcaac
atctacgccgacgaggccctgtggcgggcgaagctgcacggctgccggatcgcctccggg
ctgagcaggccggtgctgcacacgctgctcgccgatgccgccgccgtcatgcgcgatgcg
ctggccgccggtggcacctccttcgacgccctgtatgtcgacgtcaacggcgattccgga
tacttcgaacgctcgctggccgtctacggccgcgcagaccggccgtgcccgcgctgcggg
gcgccgatcgtgcgggagaagttcatgaaccgctcgtcgttttcgtgtccgcgatgccag
cggaagcctcgcccgaggacccgatag
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