Nocardia cyriacigeorgica: NOCYR_4000
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Entry
NOCYR_4000 CDS
T01756
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
ncy
Nocardia cyriacigeorgica
Pathway
ncy04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ncy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
NOCYR_4000 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncy03016
]
NOCYR_4000 (trmU)
Enzymes [BR:
ncy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
NOCYR_4000 (trmU)
Transfer RNA biogenesis [BR:
ncy03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
NOCYR_4000 (trmU)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
ThiI
Motif
Other DBs
NCBI-ProteinID:
CCF64761
UniProt:
H6R742
LinkDB
All DBs
Position
complement(4407243..4408325)
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AA seq
360 aa
AA seq
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MSGGVDSAVAAARAVDAGHDVVGVHLALSATPGTLRTGSRGCCSKEDAGDARRAADVLGI
PFYVWDFADRFKEDVIDDFVAAYAAGETPNPCLRCNEKIKFSALADRAVALGFDAVVTGH
YARLSDGVLRRAVDADKDQSYVLAVLTAEQLSRAMFPVGDTPKPRIREEAAERGLAVANK
PDSHDICFIPSGDTRAFLGAKIGIRPGAVVDADGTELATHDGVHGFTIGQRKGLGLPGPA
ADGKPRYVTDIDPDSGTVRVGSAEDLQVWTIEADRAIWTSGSAPEGPVECVVQVRAHGGT
APAVAEATGPGLTVRLREPLTGVARGQAVVLYLPDADGDQVIGSGTIAATARTAPSGAPR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtggtgtggattcggcggtggccgccgcgcgcgccgtcgacgccggtcatgac
gtggtcggcgtccatctggcgctgtcggccacaccgggcacgttgcgcaccggttccagg
ggctgctgctcgaaggaagacgccggtgatgcccgccgggccgccgacgtgctcggcatc
ccgttctacgtctgggatttcgccgaccgcttcaaggaagatgtcatcgacgatttcgtg
gcggcctacgcggcgggtgagacacccaacccgtgcctgcgctgcaacgagaagatcaag
ttctccgccttggccgatcgcgcggtcgcgctcggtttcgacgccgtcgtcaccggccat
tacgcgcggctgtccgatggcgtgctgcgccgcgcggtcgacgccgacaaggatcagtcc
tacgtgctggccgtgctgaccgccgagcagctctcgcgcgccatgttcccggtgggtgac
acccccaagccgcggatccgcgaggaggccgccgagcgcggtctggccgtggcgaacaag
cccgacagccacgacatctgcttcatcccctccggcgatacccgcgcgttcctcggtgcc
aagatcggcatccggcccggcgccgtggtcgatgccgacggcaccgaactggccacccac
gacggtgtgcacgggttcaccatcggccagcgcaaggggctcgggctgcccggccccgcc
gccgacggcaagccgcgctacgtcaccgacatcgatcccgactccggcacggtgcgggtc
ggctcggccgaggacctgcaggtgtggacgatcgaggccgaccgtgcgatctggacctcg
ggctcggccccggagggtccggtcgagtgtgtggtgcaggtgcgcgcgcacggcgggacc
gccccggccgtcgccgaggccaccggtcccgggctgacggtgcggctgcgtgagccgctg
accggcgtcgctcgcggtcaggccgtcgtgctgtatctgcccgacgccgatggcgatcag
gtgatcggcagcggcacgatcgccgcgaccgcgcgcacggccccctccggcgccccccgg
tga
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