Nocardia cyriacigeorgica: NOCYR_4261
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Entry
NOCYR_4261 CDS
T01756
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ncy
Nocardia cyriacigeorgica
Pathway
ncy03420
Nucleotide excision repair
ncy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NOCYR_4261 (uvrD)
03430 Mismatch repair
NOCYR_4261 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncy03400
]
NOCYR_4261 (uvrD)
Enzymes [BR:
ncy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NOCYR_4261 (uvrD)
DNA repair and recombination proteins [BR:
ncy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NOCYR_4261 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NOCYR_4261 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CCF65019
UniProt:
H6RAK7
LinkDB
All DBs
Position
complement(4687331..4689487)
Genome browser
AA seq
718 aa
AA seq
DB search
MERVPALDLSALDPEQAAAVRAPRGPVCVLAGAGTGKTRTITYRIAHLVAAGQVKADQVL
AVTFTARAAGELRGRLRALGLGGEANQVQARTFHAAALRQLRYFWPQVVGDVPWRLLDSK
FPVVAQAAHRAGLPSGTESVRDLLSEIEWAKSSLIAPEDYPAEAARRHRDVPFDAQRIAQ
VYSGYEALKTSPDGLLLDFDDLLLHTAAALEDYPAVADEFRGRYRCFVVDEYQDVTPLQQ
RVLDAWLGERDDLTVVGDANQTIYSFTGASTAHLLDFSRRFPDATVVRLERDYRSTPQVV
SLANRVIGMARGRIAGTRLQLIGQRPDGPEPTFTEYDDVPAEAAGVARDIAELIAAGTPA
AEIAVLYRINAQSETYEQALTERGIPYQVRGGEGFFSRAEVRQAVQALRQAAARDDLPDQ
ARTGAALVTLVRAVLAPLGLTATEPAGAQAREKWASLVALVQLTEELTTHDEQLDLPGLL
RELAARAEARHPPTVQGVTLASLHAAKGLEWDAAFLVGLSDGTLPIAHVLADDGSVADQA
GLEEERRLLYVGVTRAREHLRLSWALARNEGGRRTRRRSRFLNGLVPDDSPASRIAAPST
QRAADGTRPLCRVCAKPLIGTYSTMLGRCRKCPAELDAELLAALQEWRAEKAQAQRLREF
SVFTDTTLTAIAEQLPTDDAALAAISGIGARKIEQYGADVIALVRSRTGTNHKTAGQK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgtgcccgcactcgacctctccgccctcgaccccgagcaggccgccgccgtg
cgggcgccgcgcggcccggtgtgcgtgctcgccggcgcgggaaccggcaagaccaggacc
atcacctaccggatcgcgcatctggtcgcggccgggcaggtcaaggccgaccaggtgctc
gcggtcaccttcaccgcccgggcggcgggggaactgcgcggacgcctgcgcgccctcggc
ctcggcggcgaggcgaaccaggtccaggcgcgcaccttccacgcggcggcgctgcgtcag
ctgcgctacttctggccccaggtcgtcggtgacgtgccgtggcggctgctcgacagcaag
ttcccggtggtggcccaggccgcgcatcgggccgggttgccgtcgggcaccgagagcgtg
cgcgatctgctcagcgaaatcgaatgggccaaatcctcgctcatcgcgcccgaggattac
cccgccgaggccgcccgccgccaccgcgatgtcccgttcgacgcgcaacggatcgcgcag
gtctactccggctacgaagcgctcaagaccagcccggacggcctgctgctcgacttcgac
gatctgctgctgcacaccgccgccgcgctcgaggactatccggcggtggccgacgaattc
cgtggtcgctaccgctgtttcgtcgtcgacgaataccaggacgtcacccccttgcagcag
cgggtgctcgacgcctggctgggcgaacgcgacgatctgaccgtcgtcggcgacgccaac
cagaccatctactccttcaccggcgccagcacggcgcacctgctggacttctcccgccgt
ttcccggacgccaccgtcgtccggctcgagcgcgactaccgctctacgccccaggtggtg
tcgctggcgaaccgggtgatcggcatggcccgcggccgcatcgccggcacccggttgcag
ctgatcggccagcgccccgacgggccggagcccaccttcaccgaatacgacgacgtcccc
gccgaggcggcgggcgtggcccgcgatatcgccgaactgatcgccgcgggtacccccgcc
gcggagatcgcggtgctctaccgaatcaacgcgcagtcggaaacatatgagcaggcgctc
accgaacgcggcattccctaccaggtgcgcggcggtgaaggcttcttctcccgggccgag
gtccgccaagcggtgcaggcgttgcgccaggccgcggcccgcgacgatcttcccgatcag
gcccgcaccggcgccgcgctggtcaccctggtgcgcgcggtgctcgccccgctcgggctc
accgccaccgaacccgcaggtgcgcaggccagggagaagtgggcgtcgctggtggcgctg
gtgcaactcaccgaggaactcaccacccacgacgagcagctcgatctgccgggcctgttg
cgtgagctggccgcgcgcgccgaggccaggcacccaccgacggtgcagggcgtcaccctg
gcgtcgttgcacgcggccaagggcctggaatgggacgccgcgttcctggtcgggctctcc
gacggcacgctgccgatcgcgcacgtgctcgccgacgacggctcggtcgccgatcaggcc
gggctggaagaggagcgccgactgctctacgtcggtgtcacccgggcccgcgaacatctg
cggctgtcctgggcgctggcccgcaacgagggcggccgccgcacccggcgccgctcccgc
ttcctcaacggcctggtccccgacgattccccggcctcccgcatcgccgcgccgagcacc
cagcgcgccgccgacggcactcgcccgctgtgccgggtctgcgcgaaaccgttgatcggc
acctactcgacgatgctgggccgctgccgcaagtgccccgccgaactcgacgccgaactg
cttgccgcgcttcaggaatggcgcgccgagaaagcgcaggcccagcggctgcgcgagttc
agtgtgttcaccgacaccacgctcaccgccatcgccgagcaactgcccaccgatgacgcg
gcgctggcggcgatttcgggcatcggcgcgcgcaagatcgaacagtacggcgccgacgtc
atcgcgctggtgcgctcgcgcaccggaacgaatcacaaaaccgcaggtcaaaaatag
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