Neisseria cinerea: NCTC10294_00398
Help
Entry
NCTC10294_00398 CDS
T06828
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ncz
Neisseria cinerea
Pathway
ncz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10294_00398 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncz03019
]
NCTC10294_00398 (pnp)
03016 Transfer RNA biogenesis [BR:
ncz03016
]
NCTC10294_00398 (pnp)
Enzymes [BR:
ncz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC10294_00398 (pnp)
Messenger RNA biogenesis [BR:
ncz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC10294_00398 (pnp)
Transfer RNA biogenesis [BR:
ncz03016
]
Prokaryotic type
tRNA degradation factors
NCTC10294_00398 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
Methyltransf_FA
S1_RRP5
DUF5813
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
SQF82967
LinkDB
All DBs
Position
1:382852..384972
Genome browser
AA seq
706 aa
AA seq
DB search
MFNKHVKTFQYGNQTVTLETGEIARQAAAAVKVSMGDTVVLVAVTTNKEVKEGQDFFPLT
VDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPLFPEGFYHDIQIVAMVVSV
DPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYVNGVYVLNPTKAELAKSQLDLVVA
GTSKAVLMVESEADILSEEVMLGAVVYGHDQMQVAINAINEFADEVNPEVWDWKAPETNE
ELVAKVREIAGETIKEAFKIRQKQARSAKLDEAWNAVKEALITEETDTLAANEIKGIFKH
LEADVVRSQILDGQPRIDGRDTRTVRPLNIQTGVLPRTHGSALFTRGETQALAVATLGTS
RDEQIIDALSGEYTDRFMLHYNFPPYSTGEVGRVGAPKRREIGHGRLAKRALLAVLPEPE
DFSYTMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILDNNKFAVLT
DILGDEDHLGDMDFKVAGTTEGVTALQMDIKIQGITKEIMQIALAQAKEARLHILDQMKA
AVAGPQELSAHAPRLFTMKINQDKIRDVIGKGGETIRSITAETGTEINIAEDGTITIAAT
TQEAGDAAKKRIEEITAEVEVGKVYEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHER
VRNVSDYLQVGQVVNVKALEVDDRGRVRLSIKALLEAPAREENAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaacacgttaagaccttccaatacggtaatcaaaccgttactttggaaacc
ggcgaaatcgcccgccaagccgctgctgccgttaaagtatctatgggcgacactgttgtt
ttggttgccgttactaccaacaaagaagtgaaagaaggccaagacttcttccctctgact
gtcgattacctcgagcgtacttacgcagcaggtaaaatccctggcggtttcttcaaacgc
gaaggcaaacaaagcgaaaaagaaatcctgaccagccgtctgattgaccgtccgattcgt
cctttgttccccgaaggtttctaccacgacattcaaatcgtagcgatggtggtgtctgtt
gaccctgaaattgattctgacattcctgccatgctcggcgcatctgccgcgctggtgttg
agcggcgtaccgtttgccggtccgattggtgcggcacgcgtgggttatgtaaacggcgtg
tacgttttgaacccgactaaagccgaattggccaaatcacaattggacttggtggttgcc
ggtacttctaaagccgtgttgatggtggaatccgaagctgacatcttgtctgaagaagta
atgctgggtgcggttgtttacggtcacgatcaaatgcaagtggccattaacgccatcaat
gagtttgctgacgaagtcaatccggaagtttgggattggaaagctcctgaaaccaatgaa
gaattggttgccaaagtacgcgaaattgccggtgaaactattaaagaagcgttcaaaatc
cgtcaaaaacaagcgcgttctgccaagttggacgaagcttggaatgctgtaaaagaagcg
ttaattaccgaagaaaccgacactttggctgccaacgaaatcaaaggcattttcaaacac
ttggaagccgatgttgtccgcagccaaattttggacggtcaaccgcgtattgacggtcgc
gacacccgcactgttcgtccgttgaacattcaaaccggcgtcttgccgcgcactcacggt
tctgcattgtttacccgtggcgaaactcaagctttggccgttgcaactttgggtacttca
cgcgacgaacaaattattgatgcgctgtccggcgaatacaccgaccgcttcatgctgcac
tacaacttccctccgtactctaccggcgaagtgggtcgcgtaggtgcgccaaaacgtcgt
gaaatcggtcacggccgtttggctaaacgtgcattgttggccgtattgccggaacctgaa
gatttcagctacaccatgcgcgtagtttctgaaattaccgaatccaacggctcttcctct
atggcttccgtctgcggcggctgcttgagtctgctgtctgccggtgtgcctttgaaagca
cacgttgccggtatcgctatgggtctgattttggataacaacaaatttgccgttttgacc
gacatcttgggcgacgaagaccatttgggcgatatggactttaaagtagccggtacaacc
gaaggtgtgaccgcgctgcaaatggatatcaaaatccaaggtattaccaaagaaatcatg
caaatcgctttggctcaagccaaagaagcacgtttgcacatcttggatcagatgaaagca
gccgttgcaggcccacaagagttgtctgcacatgcgccacgcttgttcaccatgaaaatc
aaccaagacaaaatccgtgatgtgattggtaaaggcggtgaaaccattcgttcgattacc
gctgaaaccggtactgaaatcaacatcgctgaagacggtaccatcactatcgctgcgact
actcaagaagcaggcgatgcggcgaaaaaacgcatcgaagaaatcactgccgaagtggaa
gtgggtaaagtgtacgaaggtactgtggttaaaatcctcgacaacaacgttggcgcgatt
gtcagtgtgatgccgggtaaagacggtttggtacacatcagccaaatcgcccacgagcgc
gtacgcaatgtcagcgattacctgcaagtaggtcaggttgtaaacgtgaaagcattggaa
gtagacgatcgcggccgcgtacgcctgtctatcaaagctttgctggaagcgcctgcccgt
gaagaaaatgccgccgagtaa
DBGET
integrated database retrieval system
