Neisseria cinerea: NCTC10294_00713
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Entry
NCTC10294_00713 CDS
T06828
Symbol
hupB
Name
(GenBank) DNA-binding protein Hu
KO
K03530
DNA-binding protein HU-beta
Organism
ncz
Neisseria cinerea
Brite
KEGG Orthology (KO) [BR:
ncz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncz03032
]
NCTC10294_00713 (hupB)
03036 Chromosome and associated proteins [BR:
ncz03036
]
NCTC10294_00713 (hupB)
03400 DNA repair and recombination proteins [BR:
ncz03400
]
NCTC10294_00713 (hupB)
DNA replication proteins [BR:
ncz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC10294_00713 (hupB)
Chromosome and associated proteins [BR:
ncz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NCTC10294_00713 (hupB)
DNA repair and recombination proteins [BR:
ncz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NCTC10294_00713 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
UBA_7
UBA_HYPK
Lmo2446-like_N
Myb_DNA-bind_8
DUF2267
HU-DNA_bdg
DUF937
HTH_10
ACP_syn_III_C
Motif
Other DBs
NCBI-ProteinID:
SQF83276
LinkDB
All DBs
Position
1:702620..702889
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AA seq
89 aa
AA seq
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MNKSELIEAIAQEAGISKAAAQKALDATTNAVTNALKKGDTVTLVGFGTFYVGERAERQG
RNPKTGEPLTIAAAKTPKFRAGKALKDAL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtctgaattgatcgaagcgattgctcaagaagccggtatttctaaagctgcc
gcgcaaaaagctttagatgccactaccaatgcagtaaccaacgcgctgaaaaaaggcgac
acagttactttggtcggtttcggtactttctacgtcggcgaacgtgccgaacgtcaaggt
cgcaatcccaaaaccggcgaacctttgaccattgctgctgccaaaacgcctaaattccgc
gccggcaaagctttgaaagacgcactgtaa
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