Neisseria cinerea: NCTC10294_00815
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Entry
NCTC10294_00815 CDS
T06828
Symbol
hip
Name
(GenBank) integration host factor beta-subunit
KO
K05788
integration host factor subunit beta
Organism
ncz
Neisseria cinerea
Brite
KEGG Orthology (KO) [BR:
ncz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncz03032
]
NCTC10294_00815 (hip)
03036 Chromosome and associated proteins [BR:
ncz03036
]
NCTC10294_00815 (hip)
03400 DNA repair and recombination proteins [BR:
ncz03400
]
NCTC10294_00815 (hip)
DNA replication proteins [BR:
ncz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC10294_00815 (hip)
Chromosome and associated proteins [BR:
ncz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NCTC10294_00815 (hip)
DNA repair and recombination proteins [BR:
ncz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NCTC10294_00815 (hip)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
SQF83373
LinkDB
All DBs
Position
1:803152..803466
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AA seq
104 aa
AA seq
DB search
MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLARGQRIEIRGFGSFDLNH
RPARIGRNPKTGDRVEVPEKHVPHFKPGKELRERVDLALKENAN
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtctgagttaatggttcgtttggcagaagtgtttgccgctaaaaacggtacc
catcttctggcaaaagacgtagagtacagcgtaaaagtcttggtcgataccatgactcga
tcgcttgctcgaggtcaacgtatcgaaatccggggattcggcagcttcgatttgaaccat
cgtcctgcccgtatcggtcgtaaccctaaaactggagatcgagtggaagtacctgaaaaa
catgtaccccacttcaaacccggtaaggaattacgtgaacgggttgacttggctttaaaa
gaaaatgccaactaa
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