Neisseria cinerea: NCTC10294_01216
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Entry
NCTC10294_01216 CDS
T06828
Symbol
rhlE_2
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ncz
Neisseria cinerea
Pathway
ncz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10294_01216 (rhlE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncz03019
]
NCTC10294_01216 (rhlE_2)
Enzymes [BR:
ncz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC10294_01216 (rhlE_2)
Messenger RNA biogenesis [BR:
ncz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC10294_01216 (rhlE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
SQF83751
LinkDB
All DBs
Position
1:1224345..1225718
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AA seq
457 aa
AA seq
DB search
MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLP
SLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQDYIKNLPLRHTVLFGGVNMD
KQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLDMGFIDDIRKIMQM
LPRQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQNTTNANVEQHIIAVDTMQKRNLL
ERLIVDLHMPQVIVFCKTKQSVDQVTRDLIRRNLSAQAIHGDRSQQSRLETLNAFKDGSL
RVLVATDIAARGLDIAELPFVINYEMPTQPEDYVHRIGRTGRAGADGVAISLMDESEQKM
FEAIKELTGNKLLIERIEGFEPRWWEQEGSKPEKTETSEPRQRNRYESAKAQREKNTRPE
TTANDAGAACGKIAGRSRRSRREHQSCALLQPRYGVK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatccattttcctctttaggtttgggtacggaactcgtttccgcgctgaccgcg
caaggttacgaaaacccgacgcccatccaagccgccgccattcccaaagcactcgccggt
catgatttactagccgccgcccaaaccggcacaggcaaaaccgctgcctttatgctgccc
agtctggaacgcctcaaacgctacgccaccgccagcacctcgcccgcgatgcaccccgtg
cgtatgctcgtgttgaccccgacgcgcgaactcgccgaccaaatcgaccaaaacgtgcag
gactatattaaaaatctgccgctacggcataccgtcctcttcggcggtgtcaacatggac
aaacaaaccgccgacctgcgtgccggctgcgagatcgtcgtcgccacagtcggacggctc
ctagaccatgtgaaacagaaaaacatcagtttaaacaaagtcgaaatcgtcgttctggac
gaagcagaccgcatgttggatatggggttcatcgacgacatccgcaaaatcatgcagatg
ctgccccgccaacgccaaaccctgctcttttccgccaccttctccgcaccgatacgcaaa
ctggcacaagacttcatgaatgcgcccgaaaccgtcgaggttgccgcccaaaacaccacc
aacgcaaatgtcgagcagcacatcatcgcggtcgataccatgcagaagcgcaacctgctc
gaacgcctgattgtcgatctgcacatgccccaggttatcgtcttttgcaaaaccaaacag
agcgtcgaccaggtaacgcgtgatttaatccgccgcaacctctccgcacaggcgatacac
ggagaccgttcccaacagagccggctcgagacactcaacgccttcaaagacggtagcctg
cgcgtacttgtcgcaaccgatatcgccgcacgcggtctggatattgccgaactgcccttc
gttatcaattacgaaatgcccacccagcccgaagactacgtccaccgcatcggacgcaca
gggcgcgccggtgcggacggtgtggcgatttccctgatggacgaatccgaacagaaaatg
tttgaggccatcaaagaactgaccggcaacaagctgctcatcgaacgcatcgaaggcttc
gagccccgatggtgggaacaggaaggctcaaaaccggaaaaaaccgaaacaagcgaaccg
agacaacgcaaccgctacgaatccgccaaggctcagcgcgaaaaaaatacccgaccggaa
accacggcaaacgatgcgggtgccgcatgcggaaaaatcgccggtcgcagccgccgcagc
cgtcgggaacaccagtcgtgcgccctgctccaaccccgttacggcgtaaaataa
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