Neisseria cinerea: NCTC10294_01304
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Entry
NCTC10294_01304 CDS
T06828
Name
(GenBank) rna polymerase sigma-54 factor rpon
KO
K03092
RNA polymerase sigma-54 factor
Organism
ncz
Neisseria cinerea
Pathway
ncz02020
Two-component system
ncz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ncz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC10294_01304
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC10294_01304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncz03021
]
NCTC10294_01304
Transcription machinery [BR:
ncz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC10294_01304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
SQF83836
LinkDB
All DBs
Position
1:1328458..1329801
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AA seq
447 aa
AA seq
DB search
MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREVENWLSDNPLLERKDTDEFSDAEFS
HYTAPTRQIGGDEGEDMLSNIAGEQDFNQYLHAQVCEHPLSDQESACVHILIDSLDEQGY
LSDSIEDILDHTPLEWMLDEAMLKQALTALKKFDPAGVAAADLNESLILQIERLGECAAK
TAALHIVRNALDSIDGNRSQTLARIKKRLPQTDSSTLEAALDLIASLNPSPAAGFASSTP
TPYIRPDVWVEESKDGWTVSFNEDSLPPLQMNSEYCELMPSEGLSPEWKEKISEAKQRID
SLELRKATVVLLAEYIVKHQADFFTFGEIGLVPLMMKDAAAELGVAESTVSRAANQKYLS
CPRGVFALRYFFTQAVQMEEGKEAVSQHAVKAALSQLVGSEDKRKPYSDEALANLLAFRG
MEVSRRTVAKYRESLEIPAAHKRKTAE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacgttactcggaataaagctcaaacagacccagcagctcaaccagcggctgcaacaa
tctttgcgcgtattgcagatgtcgggtatcgaacttgaacgcgaggtcgaaaactggctg
tcggacaaccccctgctcgaacgcaaagacacggatgaattttccgatgccgagttcagc
cattacaccgcgcctacccgtcaaatcggcggagacgaaggcgaagatatgctgtccaac
atcgccggcgagcaggatttcaaccaatacctgcatgcgcaagtatgcgaacacccgctt
tccgatcaagaatccgcctgtgtccacatcctcatcgattcccttgatgagcagggttat
ctgagcgacagcattgaagacatcctcgaccatacgcccttggaatggatgttggacgaa
gcaatgctgaaacaagccctgaccgcattgaaaaaattcgacccggcaggcgtggccgcc
gccgatttgaacgaatcgctgatactgcagatagaaagattgggcgaatgtgctgccaaa
accgccgccctgcatatcgtccgaaacgccctcgacagcattgacggcaaccgcagccaa
accctcgcgcgaataaaaaaacgcctgccccaaaccgacagcagcacactcgaagccgca
ctcgacctcattgcttcgctcaatccctctcccgccgccggttttgcctcgtccacgccc
acgccgtatatccgcccggatgtctgggttgaggaaagtaaagacggctggacggtcagt
ttcaacgaagactccctgcctcctctgcaaatgaacagcgaatattgcgaactgatgccg
tctgaaggtctctcgcccgaatggaaggaaaaaatcagcgaagccaaacaacgtatcgat
tcgctcgaattgaggaaggcaaccgtcgtcctccttgccgaatacatcgttaaacatcag
gcagactttttcacttttggcgaaatcggactcgtccctctgatgatgaaagatgccgcc
gccgaattgggtgtggcagaaagtaccgtttcccgcgcggccaaccaaaaatatttgtct
tgcccgcgcggagtgtttgcgctacgctatttcttcacacaggcagttcaaatggaagaa
ggtaaagaagccgtcagccaacacgccgttaaagccgcactctcccagcttgtcggcagc
gaagacaaacgcaagccctattctgacgaggcactcgccaacctgctggctttccgcggc
atggaggtttcccgccgcaccgtcgccaaatacagagaatcccttgagattccggcagca
cacaaacgcaaaaccgcagaataa
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