Neisseria cinerea: NCTC10294_01464
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Entry
NCTC10294_01464 CDS
T06828
Symbol
hrpA'
Name
(GenBank) ATP-dependent DNA helicase
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ncz
Neisseria cinerea
Pathway
ncz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCTC10294_01464 (hrpA')
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncz03041
]
NCTC10294_01464 (hrpA')
03009 Ribosome biogenesis [BR:
ncz03009
]
NCTC10294_01464 (hrpA')
Enzymes [BR:
ncz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCTC10294_01464 (hrpA')
Spliceosome [BR:
ncz03041
]
Complex A
U2 snRNP components
U2 related factors
NCTC10294_01464 (hrpA')
Complex B
NCTC10294_01464 (hrpA')
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
NCTC10294_01464 (hrpA')
Ribosome biogenesis [BR:
ncz03009
]
Eukaryotic type
90S particles
Helicases
NCTC10294_01464 (hrpA')
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
AAA_19
AAA_23
nSTAND3
ABC_tran
NACHT
AAA_30
ResIII
T2SSE
AAA_11
RsgA_GTPase
ATPase
SRP54
PhoH
SLFN-g3_helicase
AAA_25
AAA_29
cobW
Motif
Other DBs
NCBI-ProteinID:
SQF83982
LinkDB
All DBs
Position
1:1487441..1488832
Genome browser
AA seq
463 aa
AA seq
DB search
MFPDFSQTLSKDRHFLQSAFKNPNKYGGLSKVEEKYRKSHEIFLKRLAALPKPEFDNTLP
VHEKLDEIKKAIAENQVTIICGETGSGKTTQLPKICLELGRGAAGLIGHTQPRRLAARSV
AERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGILLAETQTDRYLAAYDTIIIDE
AHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAERFSQHFNGAPVLEVSGRTYPVEI
LYRPLTSKDEDDAEVELTDAIVDAADELARHGEGDILVFLPGEREIREATEALRKSPLRR
NDEILPLFARLSHAEQHKIFHPSGAKRRIVLATNVAETSLTVPGIKYVIDTGLARVKRYS
ARAKVEQLHVEKISQAAARQRSGRCGRVSAGVCIRLFSEEDFNSRTEFTDPEIVRSNLAA
VILRMAALKLGDVAAFPFLEAPDQRYINDGFQVLLELGAVEAV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccgatttctcccaaaccctctccaaagaccgccacttcctgcaatccgccttc
aaaaatcccaacaaatacggcggcttgtccaaagtcgaagaaaaataccgaaaatcgcac
gaaatctttttgaagcgtttggccgcattgcccaagcccgaattcgacaacacgctgcct
gttcacgaaaaactcgacgaaatcaaaaaagccattgccgagaatcaggtaacgattatc
tgcggcgaaaccggttcgggcaaaaccacgcagttacccaagatttgtttggaactcgga
cgcggggcggcagggctgatcgggcatacccagccgcgccgtttggccgcgcgttcggtg
gcagagcggattgccgaagagctgaaatccgaaatcggcagcgcggtcggctataaagtg
cgctttaccgaccacacctcgcgcgatgcctgcgtcaagctgatgaccgacggcatcctg
ttggcagaaacccagaccgaccgttatctcgccgcctacgacacgattatcatcgacgaa
gcgcacgaacgcagcctgaacatcgacttcctcttgggctatttgaaacagctcctgccg
cgccgccccgatttaaaagtcatcatcacctcggcaaccatagacgcagaacgcttctcc
caacacttcaacggcgcgcccgtactggaagtgagcgggcgcacttatcccgtcgaaatc
ctctaccgcccgctgaccagcaaagacgaagacgatgcagaagtcgagctgaccgacgcg
attgtcgatgcggcggacgaattggcgcgacacggcgaaggcgatattttggtgtttctg
ccaggcgaacgcgaaatccgcgaagccaccgaagctctgcgcaaatccccgctgcgccgc
aacgacgaaatcctgcccctgttcgcacgcctgtcgcacgccgaacagcacaaaatcttc
catccttcgggcgcgaaacgccgcatcgtgttagcaaccaacgtcgccgaaacctcgctc
accgtgccgggcatcaaatacgtcatcgacaccggcctcgcgcgcgtcaaacgctattcc
gcacgggcgaaggtggaacagctccatgtagagaaaatctcccaagccgccgcccgccaa
cgttccggccgctgcggccgcgtctccgcaggcgtgtgtatccgactgttttcagaagaa
gatttcaacagccgcaccgaattcaccgaccccgaaatcgtccgcagcaacctcgccgcc
gtcatcctacgcatggcagcgttgaaactgggcgacgtggcggcattcccattcctcgaa
gcaccagaccagcggtatatcaatgacggttttcaggtgttgttggagttgggtgcggtg
gaggccgtctga
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