Neisseria cinerea: NCTC10294_01654
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Entry
NCTC10294_01654 CDS
T06828
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ncz
Neisseria cinerea
Pathway
ncz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10294_01654 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncz03021
]
NCTC10294_01654 (rpoC)
03400 DNA repair and recombination proteins [BR:
ncz03400
]
NCTC10294_01654 (rpoC)
Enzymes [BR:
ncz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10294_01654 (rpoC)
Transcription machinery [BR:
ncz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10294_01654 (rpoC)
DNA repair and recombination proteins [BR:
ncz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10294_01654 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
SQF84154
LinkDB
All DBs
Position
1:1681253..1685428
Genome browser
AA seq
1391 aa
AA seq
DB search
MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLK
SLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDA
KMGAEGIRELLRTLDITGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMI
MDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVG
PYLRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIRE
HPIMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM
EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYH
TKQVELGTKITVRLREWVKNEAGEFEPVVNRYETTVGRALLSEILPKGLPFEYINKALKK
KEISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEAN
AEVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQES
FNSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDR
ILGRVTASDVVDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHC
YGRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTA
RFSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGAAIKAGQTL
ATWDPHTRPMITEHAGWVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRP
TVKLLDENGLEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITG
GLPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQIL
VHDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVII
RQMLRRVNIVDSGETEFITGEQVERGDVMTANEKALEEGKEPARYENVLLGITKASLSTD
SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQEVE
QETAETQVTDE
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgttgaacttatttaatccgttgcaaactgccggcatggaagaagagtttgat
gccatcaaaatcggtattgcctctcccgaaaccatccgctcatggtcttacggcgaagtt
aaaaaacctgaaaccatcaactaccgtacgttcaaacctgagcgcgacggtttgttctgc
gccaaaatctttggcccggtcaaagactatgaatgtttgtgcggtaaatacaaacgcttg
aaatttaaaggcgtaacctgtgaaaaatgtggcgtagaagtgaccctgtccaaagtacgc
cgcgaacgcatgggccacattgaattggctgcaccagttgcacacatttggttcttgaaa
tccctgccttcccgcttgggtatggtactggacatgactttgcgcgacatcgaacgcgta
ttgtactttgaagcatttgtggtaaccgatcccggcatgactccgttgcaacgtcgtcaa
ttgttgactgaagacgattactacaacaaactggacgaatacggcgatgactttgatgcc
aaaatgggtgcagaaggtatccgcgaattgctgcgcaccttggatattaccggtgaaatc
gaaatccttcgtcaagagctggaatctaccggttctgacaccaaaatcaaaaaaatcgcc
aaacgtttgaaagtattggaagccttccaccgttccggtatgaaactggaatggatgatt
atggacgtgctgccggtattgccgcctgatttgcgtccgttggttccattagatggcggt
cgttttgccacttccgatttgaacgatttataccgtcgcgtcatcaaccgtaacaaccgt
ctgaaacgactgctggaactgcacgctcctgacatcattgttcgcaatgaaaaacgtatg
ttgcaagaagcggttgactcgctgttggataacggccgtcgcggtaaagccatgaccggt
gccaacaagcgtccactgaaatcattggcagacatgattaaaggtaagggcggtcgtttc
cgccaaaacctgctgggtaaacgtgtggactactccggtcgttccgtgattaccgtaggt
ccatacctgcgtctgcaccaatgcggtctgccgaaaaaaatggctttggaactgttcaag
ccgttcattttccataaactggaaaaacaaggtttggcatctaccgttaaagcagcgaaa
aaattggtagagcaagaagtaccagaagtatgggacatcttggaagaagtcattcgcgaa
catccgattatgctgaaccgtgcgccgaccctgcaccgtttgggtattcaagcgtttgaa
cctatcctgattgaaggtaaagccattcagctgcatccgttggtatgtgccgcgtttaac
gccgactttgacggtgaccaaatggcggtacatgttccattgagcttggaagcgcaaatg
gaagcacgcacgctgatgctggcttcaaataacgtattgtctccagctaacggcgaacca
atcatcgtaccttctcaagatatcgtattgggtctgtactacatgacccgcgaccgtatc
aatgctaaaggcgaaggtagcctgtttgctgatgtgaaagaagtgcatcgtgcataccat
accaaacaggttgaactgggtacgaaaattaccgtacgtctgcgcgaatgggtgaaaaac
gaagcaggtgagtttgagcctgtcgttaaccgttatgaaacaaccgtcggccgtgcattg
ttgagcgaaatcttgcctaaaggcctgccgttcgagtacatcaacaaagcgctgaagaaa
aaagaaatttctaaactaattaacgcatcattccgtctgtgcggcttgcgtgacacagtt
attttcgccgaccacctgatgtataccggtttcggttttgcggctaaaggcggtatttcc
attgcggttgacgatatggaaattccgaaagaaaaagcagccttgctggccgaggctaat
gccgaagttaaagaaatcgaagaccaataccgtcaaggtttggtaaccaacggcgaacgt
tacaacaaagtggtcgatatttggggtcgtgccggcgataagattgctaaagcgatgatg
gacaacctgtccaaacaaaaagtcatcgaccgtgacggcaacgaagttgatcaagagtcc
ttcaactctatttacatgatggccgactctggtgcccgtggttctgcggctcagattaaa
cagttgtccggtatgcgtggtttgatggctaaacctgacggctcgattattgaaacgccg
attacctcaaacttccgcgaaggtctgaccgtattgcaatactttattgcgacccacggt
gcacgtaagggtttggcggataccgcattgaaaaccgcgaactccggttacctgacccgt
cgtctggtagatgtaactcaagacttggtcgttgttgaagacgattgcggtacttcagac
ggctttgtcatgaaggcagtggtacaaggcggtgatgtaattgaagcattgcgcgatcgt
attttgggtcgtgttaccgcgtctgacgttgtcgatccgtcaagtggcgaaacattggtt
gaagcaggcacgttgttgactgaaaaactggtagatatgatcgaccaatccggtgtcgat
gaagtcaaagtccgtactccgattacttgtaaaacccgacatggcttgtgtgcgcactgt
tatggtcgcgacttggcacgcggtaagctggttaacgccggtgaggcagttggtgtgatt
gctgcacaatccattggtgaaccgggtacccagttgaccatgcgtacgttccacatcggt
ggtgcggcatcccgtgcggcagcagccagccaagttgaagccaaatccaacggtacggca
cgtttcagcagccagatgcgttacgttgccaacaataaaggcgaattggttgtcatcggc
cgctcttgcgaagtcgtgattcacgacgatatcggtcgcgaacgtgaacgtcacaaagta
ccttacggtgcaatcctgctggtacaagacggcgcagccattaaagccggccaaacgttg
gcaacttgggatccgcatacccgtccgatgattaccgaacacgcaggttgggtgaaattc
gaaaacgtggaagagggtgtaaccgttgccaaacaaactgacgatgtaaccggtttgtcc
actttggtggtgattgacggtaaacgccgttccagcagcgcatccaaactgctgcgtccg
actgtgaaactgttggatgaaaacggtctggaaatctgtatcccgggtacttctactccg
gtatccatggcattcccagtgggcgctgtgattaccgtacgcgaaggtcaggaaatcggt
aaaggtgacgtattggcgcgtattccgcaagcctcttccaaaacccgcgacattaccggt
ggtctgccgcgcgttgccgagctgtttgaagcacgcgtgccgaaagatgcaggtatgctg
gcggaaattaccggtaccgtttccttcggcaaagagaccaaaggcaagcaacgtctgatt
atcactgacgtggacggtgtagcatacgagactttgatttccaaagagaaacaaattctg
gtacacgacggtcaagtggtaaaccgcggtgaaaccatcgtggacggagctgttgatccg
catgatattctgcgtctgcaaggtatcgaagcactggcacgctacattgttcaagaggtg
caagaggtttaccgtctgcaaggtgtgaagatttccgataaacacatcgaagtcatcatc
cgtcagatgctgcgccgtgtgaatattgtcgattcaggagaaaccgaattcattaccggt
gagcaagtcgaacgcggcgatgtgatgacagccaatgaaaaagcgttggaggaaggtaaa
gagccggcacgttacgaaaacgtattgttgggtattaccaaagcctccctgtctaccgac
agcttcatttctgctgcatcgttccaagaaacgacccgcgttctgaccgaagccgccatc
atgggcaaacaagacgagttgcgtggtctgaaagagaacgtaattgtcggtcgtttgatt
cctgccggtactggtttgacttaccaccgcagccgtcatcaacaatggcaagaggtggag
caggagactgctgaaacccaagtaacggatgaataa
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